Oceanithermus profundus: Ocepr_1375
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Entry
Ocepr_1375 CDS
T01369
Name
(GenBank) DNA replication and repair protein RecR
KO
K06187
recombination protein RecR
Organism
opr
Oceanithermus profundus
Pathway
opr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
opr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Ocepr_1375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opr03400
]
Ocepr_1375
DNA repair and recombination proteins [BR:
opr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ocepr_1375
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Ocepr_1375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
Toprim
RecR_HhH
RecR_C
RecR_ZnF
HHH
HHH_5
zf-C3HC4_3
EGF_LMN_ATRN
HHH_8
RH_dom
DUF5810
Motif
Other DBs
NCBI-ProteinID:
ADR36831
UniProt:
E4U901
LinkDB
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Position
complement(1408070..1408663)
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AA seq
197 aa
AA seq
DB search
MRYPDRLLALIRALARLPGVGPKSAQKLGLHLAQNKAEAAELAQALEEVRRHVGVCERCG
NLAEGPLCPVCADPARDAGVIAVVETAADVLAIEKSGEYTGVYHVLGGALNPLEGVGPEQ
LRVESLLERARSAREVILATSMTVEGEATAAYLSERLAGGPAKLSRPAYGLPVGGTLEYV
DEVTLARALAHRQPVSE
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
ttgaggtaccccgaccggctgctcgccctgatccgggcgctggcccggcttcccggcgtg
ggtcccaagagcgcccagaagctgggccttcatctggcgcagaacaaggccgaggcggcg
gagctggcccaggcgctggaggaggtgcggcgccacgtgggcgtgtgcgaacgctgcggc
aacctggccgaggggccgctctgcccggtctgcgccgaccccgcgcgcgacgcgggggtg
atcgccgtggtcgagaccgcggccgacgtgctggccatcgagaagagcggggagtacacc
ggggtctaccacgtcctcggcggcgcgctcaacccgctcgagggcgtggggcccgaacag
ctgcgcgtcgagagcctgctcgagcgggcgcgctcggcgcgcgaggtcatcctggccacc
tcgatgaccgtcgagggtgaggccaccgccgcttacctgagcgaacggctcgccggcggt
ccggcgaagctgagccggccggcgtacggccttccggtcggaggtactttagaatacgtg
gacgaggtaacgttggcccgggcgctggcgcaccgtcaacccgtgtccgagtag
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