Oceanithermus profundus: Ocepr_1852
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Entry
Ocepr_1852 CDS
T01369
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
opr
Oceanithermus profundus
Pathway
opr03030
DNA replication
opr03430
Mismatch repair
opr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
opr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ocepr_1852
03430 Mismatch repair
Ocepr_1852
03440 Homologous recombination
Ocepr_1852
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
opr03032
]
Ocepr_1852
03400 DNA repair and recombination proteins [BR:
opr03400
]
Ocepr_1852
Enzymes [BR:
opr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ocepr_1852
DNA replication proteins [BR:
opr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ocepr_1852
DNA repair and recombination proteins [BR:
opr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ocepr_1852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
tRNA_anti_2
DUF655
Motif
Other DBs
NCBI-ProteinID:
ADR37304
UniProt:
E4U9Z0
LinkDB
All DBs
Position
complement(1871051..1874719)
Genome browser
AA seq
1222 aa
AA seq
DB search
MKFAHLHQHTQFSLLDGAAKLDELIQWVKQTTPDDPALATTDHGNLFGAVQFYKKATAAG
VKPIIGYEAYVAAESRFDRTMRKGLDGGYFHLTLLAKDFKGYQNLVRLASRAYLEGFYMK
PRIDREILREHNEGIIALSGCLGAEIPQFILADREDLAEERLNEYLEIFGDRYFIEIQDH
GLEEQKKVNAVLREFAQKYGLGMVATNDGHYVKQEDARAHEVLLAIQSKATLADEDRWKF
PCDEFYVKTPEEMKKALPDWPDEIFSNSAEIAAMCNVELPVGDKMTYRIPRYPLPEGRDE
NQYLRELTFKGLLERYPDRVNPALYRAYLTRLEIEPAEDEEDLILQLARLDRKARERVDF
FPDVRNVQEWDGWATLARAEYELGTIEQMGFPGYLLIVQDYINWAKNHGISVGPGRGSAA
GSLVAYAIRITNIDPLEFGLLFERFLNPARVSMPDIDTDFSDVRRDEVIDYVRERYGEDK
VAQIATFGTLASKAALKDVARVYGLEYKRAEQLAKLIPVQFGKPLPLARAMEQIPELKAA
MRQDETVREVLEIAQRLEGLNRHASVHAAGVVIADEPLTNLVPLMRDTRGDGVVTQYDMG
SVEALGLLKMDFLGLRTLSFLDEAKRIVKESAGVELDYDNLPLDDPKTFEMLGRGDTKGV
FQLEGTGMTNTVKAFKPERLHDIIAIVSLYRPGPMDNIPTYLRRRHGQEPVSYAEFPHAA
EMLEPILAETYGIPVYQEQIMQIASAVAGYTLGEADLLRRAMGKKKVEELKAHRDRFITG
AEKRGVPPDEASRIFDLLEAFANYGFNKSHAAAYSLISYQTAYVKAHFPVEFMAALLTVE
RRNSDKVAEYIRDAEAGGIHVLPPDINRSGADFRVVGREILFGLSAVKNVGEGAVESILN
EREKGGPFRSLPDFLRRVDLHHVNKRALESLIKAGAFDAFGERGQMLDAMEGLLKWAAAE
QQKAAGGLTGLFDDGLTEPPLPETAPLEEVIRLRFEKEALGIYVTGHPLEHYPGLAEAAT
CQVTELARWYEQNSGSKSRVRVLLAGMVEQITRRSTRSGGMMARFNLADASGALEVVVFG
RAYDRVMTRVKEDMPVIAVCDVEPDADGESLRVMVQDVFLYEELDGLPQVLELGFDLSLM
DDERLLDLRSLLDEYPGVVPVYLKVRGPGGWALLEAREVRVDPGVAPELEKLEGLEVRSL
PDREALLAGKLGGEGQAEVVPF
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcgcccacctgcaccagcacacccagttctcgttgctcgacggcgcggccaag
ctggacgagctgatccagtgggtcaaacagacgacgccggacgatccggcgctcgcgacc
acggaccacgggaacctcttcggggcggtgcagttctacaagaaggccacggccgccggg
gtcaagcccatcatcggctacgaggcctacgtggccgccgagagccgcttcgaccgcacg
atgcgcaagggcctcgacggcggctacttccacctgaccctattggccaaggatttcaag
ggctaccagaacctggtgcggctcgcgagccgggcctacctcgagggcttttacatgaag
ccccgcatcgaccgcgagatcctgcgcgagcacaacgagggcatcatcgcgctttcgggc
tgcctgggggcggagatccctcagttcattctggcggaccgcgaagacctcgccgaggag
cggctgaacgagtacctggagatcttcggcgaccgctacttcatcgagatccaggaccac
gggctcgaggagcagaagaaggtcaacgccgtgctgcgcgagttcgcgcagaagtacggc
ctgggcatggtggccaccaacgacggccactacgtcaagcaggaggacgcccgcgcccac
gaggtcctcctggccatccagtcgaaggcgacgctggccgacgaggaccgctggaagttc
ccctgcgacgagttctacgtcaagacgcccgaggaaatgaaaaaggcgctccccgactgg
cccgacgagatcttcagcaacagcgccgagatcgcggcgatgtgcaacgtcgagctgccg
gtgggcgacaagatgacctaccgcatcccgcgttacccgctgcccgaggggcgcgacgag
aaccagtacctgcgcgaattgaccttcaaggggctcttggagcgctaccccgaccgggtg
aacccggcgctctaccgcgcctacctgacgcggctcgagatcgaaccggccgaggacgag
gaggacctgatcctgcagctcgcgcggctggaccgaaaggcgcgggagcgggtggacttc
ttccccgacgtgcgcaacgttcaggagtgggacggctgggccacgttggcgcgggccgag
tacgagctgggcacgatcgagcagatggggttccccggctacctgctgatcgtgcaggac
tacatcaactgggccaagaaccacggcatcagcgtggggcccgggcgcggcagcgccgcg
ggcagcctggtggcctacgcgatccgcatcaccaacatcgacccgctcgagttcggcctg
ctcttcgagcgcttcctcaaccccgcgcgcgtgagcatgcccgacatcgacaccgacttc
tcggacgtgcgccgcgacgaggtgatcgactacgtccgcgagcgctacggcgaggacaag
gtggcccagatcgccaccttcgggacgctggcctccaaggcggcgctcaaggacgtggcc
cgggtctacgggctcgagtacaagcgcgccgagcagctggccaagctgatcccggtgcag
ttcggcaagccgctgccgctggcgcgggcgatggagcagatccccgagctcaaggcggcg
atgcgccaggacgagacggtgcgcgaggtcctggagatcgctcagcgccttgaggggctc
aaccgccacgcctcggtgcacgccgccggcgtggtgatcgccgacgagccgctgaccaac
ctggtgccgctgatgcgcgacacccgcggcgacggcgtcgtcacccagtacgacatgggc
tcggtggaggcgctgggccttttgaagatggacttcctggggctgcgcacgctctcgttc
ctcgacgaagcgaagcgcatcgtcaaggaatccgcgggcgtcgagctcgactacgacaac
ctgcccctcgacgaccccaagaccttcgagatgctggggcgcggcgacaccaagggcgtc
ttccagctcgagggcacggggatgacgaacacggtcaaggccttcaagcccgagcggctg
cacgacatcatcgccatcgtctcgctctaccggccggggccgatggacaacatccccacc
tacctgcgccgccgccacgggcaggagccggtgagctacgccgagtttccccacgccgcc
gaaatgctcgagcccatcctggccgagacctacggcatccccgtctaccaggagcagatc
atgcagatcgccagcgcggtggcgggctacaccctgggcgaagccgacctgcttcgccgc
gcgatgggcaagaagaaggtcgaggagctgaaggcccaccgcgaccgcttcatcaccggc
gccgagaagcggggcgtgccccccgacgaggccagccgcatcttcgacctgctcgaggcc
ttcgccaactacggtttcaacaagtcgcacgccgcggcctactcgctgatctcgtaccag
acggcctacgtcaaggcccatttcccggtcgagttcatggccgcactgctcacggtggaa
cgccgcaactcggacaaggtggccgagtacattcgcgacgccgaggccggcggcatccac
gtgctgccgcccgacatcaaccgctcgggggccgacttccgcgtcgtcgggcgcgagatc
ctttttggcctttcggcggtcaagaacgtgggcgagggcgccgtggagagcattttgaac
gagcgcgagaagggcgggcccttccgcagcctgcccgacttcctcaggcgggtggacctg
caccacgtcaacaagcgggcgctcgagtcgctcatcaaggccggcgccttcgacgccttc
ggcgagcgcggccagatgctcgacgccatggagggcctgctcaagtgggccgccgccgag
cagcagaaggctgcgggcggcctgaccggcctcttcgacgacggcctcaccgagccgccg
ctgcccgagaccgcgccgctcgaggaggtgatccggctgcgcttcgagaaggaggccctg
ggcatctacgtgaccgggcacccgctcgagcactaccccggcctcgccgaggcggccacc
tgccaggtcaccgagctggcgcgctggtacgagcagaactcgggctccaagtcgcgggtg
cgggtgctgctcgcgggcatggtcgagcagatcacccgccgctccacgcgctcgggcggg
atgatggcgcgcttcaacctggccgacgcctcgggggcgctcgaggtggtcgtcttcggc
cgcgcctacgaccgggtgatgacccgggtcaaggaggacatgccggtcatcgccgtctgc
gacgtggagcccgacgccgacggcgagagcctgcgggtgatggtgcaggacgtcttcctc
tacgaggagctggacggcctgccccaggtgctcgagctgggcttcgacctgagcctgatg
gacgacgagcggttgctcgacctgcgcagcctgctcgacgagtacccgggcgtcgtgccc
gtctatctgaaggtgcgcggccccgggggctgggcgcttctggaggcgcgcgaggtgcgc
gtcgaccccggcgttgcgcccgagctggaaaagctggaggggctcgaggtgcgctcgctg
cccgaccgcgaagcgctgctcgcgggcaagctgggcggcgagggccaggcggaagtggtg
cctttctaa
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