Oceanithermus profundus: Ocepr_1963
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Entry
Ocepr_1963 CDS
T01369
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
opr
Oceanithermus profundus
Pathway
opr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
opr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Ocepr_1963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opr03400
]
Ocepr_1963
DNA repair and recombination proteins [BR:
opr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ocepr_1963
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
ABC_tran
AAA_29
AAA_33
DUF2813
Motif
Other DBs
NCBI-ProteinID:
ADR37415
UniProt:
E4UA38
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All DBs
Position
complement(1996460..1997494)
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AA seq
344 aa
AA seq
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MILTRLRQQNFRNLTSLELVLPPGPLALVGPNASGKTNLLEAIFLALGGEVRGALADRVR
FGAAEARLFAEVETQLGVVRFEQRFGRGGREIRLNEAPASLRELAEYAGAVWIRPEDIAL
VRGGPEERRRWLDQALMRFSPRYRALLSAYEKTLRQRNAALKTSPRGLGVWNERLAGYGE
QVLHWRRRILERLAPLAAAAYRELDAAPLVLELRETAPPERLAEVLEANLQEELERGVTL
AGPHRDDVRLLLGGLDAVKFASRGEARSVALALRLAEHRLLAEHHGEPPLLLVDDFAAEL
DARRQAALLAYASGLPQAVLSGTHAPEGWSRTLRIEAGVWNLEG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatcctcacccggctgcgccagcagaacttccgcaacctgacgagcctggagctggtg
ctgccgccgggcccgctggcgctggtgggccccaacgccagcggcaagaccaacctgctc
gaggccatcttcctggccctgggcggcgaggtgcggggggcgctggccgaccgggtgcgc
ttcggcgcggccgaggcgcggctgttcgccgaggtggagacccagctgggggtggtgcgc
ttcgagcagcgcttcggccgcggcgggcgcgagatccggctcaacgaggccccggcgagc
ctgcgcgagctggccgagtacgccggggcggtctggatccggcccgaggacatcgccctg
gtgcgcggcggccccgaggagcgacggcgctggctcgaccaggcgctcatgcgcttctcg
ccccgctaccgggcgctgctctcggcctacgagaagacgctgcgccagcgcaacgccgcc
ctcaagacgagcccgcgcggcctcggggtctggaacgagcggctggccggctatggcgag
caggtgctgcactggcggcggcgcatcctcgagcgtctggccccgctggcggccgcggcc
taccgcgagctcgacgccgcaccgctggtgctggagctgcgcgagaccgccccgcccgaa
cggctggccgaggtgctggaggccaacctgcaggaagagctcgagcgcggcgtcaccctg
gcggggccccaccgcgacgacgtgcgcctgttgctgggcggcctcgacgcggtcaagttc
gccagccgcggcgaggcccgcagcgtggcgctggcgctgcgcctggccgagcaccggctc
ctggccgaacaccacggcgagccgccgctcttgctcgtcgacgacttcgccgccgagctc
gacgcccgccgccaggcggcgctcctggcctacgcgagcgggctgccgcaggcggtgctc
agcggcacccacgccccggaggggtggtcccggacgctgcgcatcgaggccggggtctgg
aacctggaaggctag
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