Oceanithermus profundus: Ocepr_2193
Help
Entry
Ocepr_2193 CDS
T01369
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
opr
Oceanithermus profundus
Pathway
opr00061
Fatty acid biosynthesis
opr00071
Fatty acid degradation
opr01100
Metabolic pathways
opr01212
Fatty acid metabolism
opr02024
Quorum sensing
opr04146
Peroxisome
Module
opr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
opr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Ocepr_2193
00071 Fatty acid degradation
Ocepr_2193
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Ocepr_2193
09145 Cellular community - prokaryotes
02024 Quorum sensing
Ocepr_2193
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
opr01004
]
Ocepr_2193
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
opr04147
]
Ocepr_2193
Enzymes [BR:
opr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Ocepr_2193
Lipid biosynthesis proteins [BR:
opr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Ocepr_2193
Exosome [BR:
opr04147
]
Exosomal proteins
Exosomal proteins of breast milk
Ocepr_2193
Exosomal proteins of breast cancer cells
Ocepr_2193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
GH3
Motif
Other DBs
NCBI-ProteinID:
ADR37642
UniProt:
E4UAD7
LinkDB
All DBs
Position
complement(2240435..2242303)
Genome browser
AA seq
622 aa
AA seq
DB search
MKGTLLEPLFRWAEVRPQAPALRVKRLGVWQPRSWRAWADEVLDLAGGLEALGLGAGGVL
AVLGRNAPEWVTAELAAQALGALPLGLYADAMADEVGWFLEYAEAVGVVVADEEQLDKVL
PHLDRLRFVLVWEEAGMSRYWSDKVRPYSAVLEAGRARREAVRAGLAALTPETVALLAPT
SGTTGRSKLAMLSHANLMAGHHALRDVLGLRGDEWLFSYLPLAWIGEQMLTVVQTLALGL
LVHFPSEPATLAEDLKEVQPDFYLAPPRLWEDAAAFVQSRAQEADWLKRRVFRWGLDALL
EGARRGFRGEGVGPGLDLARAAAYPLVARPLRGRMGLAATRVAITGGAPLGPEVFTFYRA
IGLDIRQVYGQSETAASTCAHPAGDAPPETVGPPLPGTEVKISEEGEILVKGPQVFVGYY
KNEEATRETFTPDGWFKSGDAGTFDERGHLIVLGRLKEVGHLADGTRFAPQLLENRLKYS
PFIREVVVLGHDRPFVALLVEIDPENVQNWARRRRIPFTTYQSLAGRDEVYELIAREIAA
ASAQMPEALRPRRFAVLPKELHPDDEEITRTRKVKRNVVEVRYAPLIEGLYGGAERVRLE
LPIRFEGGEDVLQAEVRIADVL
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggggacgctgctcgagcccctcttccgctgggccgaggtgcgcccgcaggcgccg
gcgctccgggtcaagcgcctgggtgtctggcagccgcgcagctggcgcgcctgggcggac
gaggtcctcgacctggcgggcggcctggaggcgctggggctgggggccgggggcgtgctc
gcggtgctggggcggaacgcccccgagtgggtgaccgccgagctcgcggcccaggcgctg
ggggcgctgccgctgggcctctacgccgacgcgatggccgacgaggtgggctggttcctc
gaatacgccgaggccgtcggggtggtggtggccgacgaggagcagctcgacaaggtgctg
ccccacctggaccggctgcgcttcgtcctcgtctgggaggaggcggggatgagccgctac
tggtcggacaaggtccgcccctactcggcggtgctggaagccggccgcgcccgccgcgag
gcggtgcgcgcggggctcgcggcgcttacgcccgagaccgtggccctgctcgcgcccacc
tcgggcacgaccgggcgcagcaagctggccatgctcagccacgccaacctgatggcgggc
caccacgcgctgcgcgacgtgctcggcctgcggggggacgagtggctgttctcgtacctg
ccgctcgcctggatcggcgagcagatgctcaccgtggtgcagacgctggcgctggggctc
ctggtgcacttcccctcggagccggccacgctggccgaggacctgaaggaggtgcagccc
gacttctacctggccccgccgcggctgtgggaggacgccgccgccttcgtgcagagccgt
gcgcaggaggcggactggctcaaacggcgggtcttccgctggggtctggacgcgcttttg
gagggggcgcgccggggcttccgcggcgagggcgtggggccgggtctcgatctggcgcgg
gccgcggcctacccgctggtggcgcggccgctgcgcgggcggatggggctcgcggccacc
cgcgtggccatcaccggcggcgccccgctcggtcccgaggtcttcaccttctaccgcgcc
atcggcctggacatccgccaggtctacggccagtcggagacggccgcgtccacctgcgcc
caccccgccggcgacgccccgcccgagacggtgggcccgccgctgccgggcaccgaggtg
aagatctccgaggagggcgagatcctggtcaaggggccccaggtcttcgtgggttactac
aagaacgaggaagcgacccgcgagaccttcaccccggacggctggttcaagagcggcgac
gccgggaccttcgacgagcgcggccacctgatcgtgctgggccggctcaaggaggtgggg
cacctggccgacgggacccggttcgcgccgcagctgctcgagaaccgcctcaagtactcg
cccttcatccgcgaggtggtggtgctgggccacgaccgccccttcgtggccctgctcgtc
gagatcgaccccgagaacgtgcagaactgggcgcgccgccggcgcatccccttcaccacc
taccagagcctggccgggcgcgacgaggtctacgagctgatcgcgcgcgagatcgccgcg
gcaagcgcccagatgcccgaggccctgcgcccgcggcgcttcgcggtgctgcccaaggag
ctgcaccccgacgacgaggagatcacccgcacccgcaaggtcaagcgcaacgtcgtcgag
gtgcgctatgcgccgctcatcgagggcctctacgggggcgcggagcgggtgcggctcgag
ctgcccatccgcttcgagggcggcgaggacgtgctgcaagcggaggtgaggatcgccgat
gttctttga
DBGET
integrated database retrieval system
