Brucella pseudogrignonensis: A8A54_04125
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Entry
A8A54_04125 CDS
T04415
Name
(GenBank) ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
ops
Brucella pseudogrignonensis
Pathway
ops03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ops00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A8A54_04125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ops03019
]
A8A54_04125
03009 Ribosome biogenesis [BR:
ops03009
]
A8A54_04125
Enzymes [BR:
ops01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
A8A54_04125
Messenger RNA biogenesis [BR:
ops03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A8A54_04125
Ribosome biogenesis [BR:
ops03009
]
Prokaryotic type
rRNA processing factors
A8A54_04125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
CDC45
RhlB
zf-CCHC
Motif
Other DBs
NCBI-ProteinID:
ANG95749
LinkDB
All DBs
Position
1:complement(853110..855863)
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AA seq
917 aa
AA seq
DB search
MSNKMLIDASHPEETRVIVTRGNKIEEFDFESEHKKQLKGNIYLARVTRVEPSLQAAFVE
YGGNRHGFLAFSEIHPDYYQIPVADRLALLEAEAKAARAEDEDEEPKAKNDRSRRHRRRG
RRDGQNGDSHSGSSNSGLPAAEPVGPAFENYVPGTPAIVLMKQAGHVISEAIDTDNGDDD
DDNDVENEEDIVESVGSEDAMEELPSHGRTSRRQYNIQEVIKRRQIILVQVVKEERGNKG
AALTTYLSLAGRYSVLMPNTARGGGISRKITNPQDRKRLKEIVKELEVPQGMGVILRTAG
ANRTKAEVKRDYEYLMRMWENVRTLTLQSTAPSLVYEEGSLIKRSIRDLYNKDITEILVS
GETGYREAKDFMRMLMPSHAKVVQPYREQVPVFTRYGLEAQLDRMLLPQVTLKSGGYLII
NQTEALVAIDVNSGRSTREHSIEDTALQTNLEAAEEVARQLRLRDLAGLIVVDFIDMEEK
RNNRAVEKKMKDCLKDDRARIQVGRISHFGLLEMSRQRIRASVLESTMQVCQHCGGTGHI
RSDSSMALHIIRGIEDYLLRHSGYDIVVRTPAASALYVLNHKRQLLADLEGRFGANISID
ADESVGHQHFVIDKGAPSTRPVTIQPVQPMIYEDDIEDPEIPLEDDDAEEEIKAEAPARE
ESSEEGDRKRRRRRRRRGGRDRDNREQTEQVEAGSDDSDEDDEEDNASSSNASQSDEDRR
KKRRRGRRGGRKNRREDDIQFNKVPDPEFVGYTPVIPAKVEKQPVDVVVAEAVAVETVTV
EATEAAPAAETVADEKPAKPARKPRGRKTAKSEEAANDDVVVAEPAEEPAKPARKTRSRK
KAVEEEVAAPAEDAETAKPKRRTRKAAVKPEVEEVAVEPEAAPVAEAQKVTEPVVTSSDT
EEQKPKRGGWWQKKGFF
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacaaaatgcttatagatgcctcccacccggaggagacgcgcgttatcgtaacg
cgtgggaacaagattgaagaattcgacttcgagtcggaacataagaagcagctgaagggt
aatatctatctcgcacgcgttacccgcgtcgaaccatctcttcaggctgcgttcgtggag
tatggcggcaatcgccacggcttcctcgcattctctgaaattcatccggattattaccaa
atcccggttgctgatcgtctggccctgctcgaagcggaagcaaaagctgcgcgcgcagaa
gatgaagatgaagagccaaaggcaaagaacgaccgttcgcgccgtcatcgccgtcgcgga
cgtcgtgatggccagaacggtgattcgcattcaggcagttcgaatagcggcttgcctgca
gctgaacctgtcggaccggcttttgaaaattacgttcctggcactcctgccatcgtattg
atgaagcaggctggacatgtcatttccgaagcaatcgacaccgacaatggtgacgatgat
gacgacaatgatgttgagaacgaagaagacatcgttgaatcggtaggctcggaagatgcg
atggaagaacttccttcgcatggccgcaccagccgtcgtcagtacaatattcaggaagtc
atcaagcgccgccagatcattctggttcaggtcgttaaggaagagcgcggcaataagggc
gcagctctcaccacatatctgtcgcttgctggccgttactcggttctgatgccaaacacc
gcgcgcggtggcggcatttcgcgcaagatcaccaatccgcaggatcgcaagcgcctgaag
gaaatcgtcaaggaactcgaagtgccgcagggcatgggcgtgatccttcgtaccgctggc
gcaaaccgcaccaaggcggaagtcaagcgcgactacgaatatctgatgcgcatgtgggaa
aatgtccgcacgctgacattgcagtcgacagcgccttccctcgtctacgaagaaggcagc
ctgatcaagcgctcgatccgcgatctttataacaaagacatcaccgagattctcgtatcg
ggtgaaaccggttatcgcgaagcgaaggacttcatgcgtatgctcatgccgagccacgcc
aaggtcgttcagccttaccgcgaacaagtgccagtcttcacgcgctatggtctggaagca
cagcttgatcgtatgcttctgccacaggtaacgctgaaatccggcggttatctcatcatc
aaccagaccgaagctctggttgcaatcgacgtgaactccgggcgttcgacccgtgaacat
tcgattgaagacactgcactgcagacaaatctggaagcagcggaagaagttgcgcgccag
ctgcgtctgcgcgaccttgcaggtcttatcgtcgtcgacttcatcgacatggaagaaaag
cgcaacaatcgcgctgtcgaaaagaagatgaaggattgcctgaaggacgaccgtgcccgc
attcaggtcggccgtatctcgcatttcggccttctggaaatgtcgcgtcagcgtattcgc
gcatccgttctcgaaagcacgatgcaggtttgccagcattgcggcggcaccggtcatatc
cgttccgactcgtccatggcgctccatatcatccgtggcatcgaagactatctgctgcgt
cattcgggctacgacattgtcgttcgcacgcctgcagcgtctgctctctatgtcctcaat
cacaagcgccagctgcttgctgatctggaaggccgtttcggtgccaatatcagcatcgat
gccgatgaaagcgtcggacatcagcattttgtcatcgacaagggggcgccttcgacacgt
ccagtaaccatccagcctgtacagccgatgatttacgaagacgatatcgaagatcctgag
attccacttgaggacgacgacgccgaagaagaaatcaaggctgaagcccctgctcgcgaa
gaaagcagcgaagaaggtgatcgcaagcgccgtcgtcgccgtcgccgtcgtggtggtcgt
gatcgcgacaatcgcgaacagactgagcaggttgaagcaggctctgacgattcagacgaa
gacgatgaagaagacaacgcatcttcgagcaatgcctcgcagagcgatgaagatcgtcgc
aagaagcgtcgtcgtggtcgtcgtggcggtcgcaagaaccgtcgtgaagacgatattcag
ttcaacaaagtacctgatcctgagttcgtcggttacacgcctgtcattcctgcgaaggta
gaaaaacagcctgttgatgtggttgttgctgaggccgttgcggttgaaaccgtcactgtt
gaagcgactgaagctgctccggctgctgaaacagttgcagacgaaaagcctgcgaagcca
gcgcgcaagccacgcggtcgtaagactgcaaagagcgaagaagcggcgaatgacgatgtc
gtcgttgcagagccagcagaagaacctgcaaagcctgctcgcaaaacacgttcgcgcaag
aaggctgttgaggaagaagtcgcagctccagctgaagatgcagaaaccgcaaagcctaag
cgtcgtacacgcaaggctgctgtaaagccggaagttgaggaagttgcggtggaaccagag
gcagcgcctgttgcagaagcgcagaaggttaccgagcctgtcgtcacctctagcgatacg
gaagagcagaagccgaagcgcggcggctggtggcagaagaagggctttttctaa
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