KEGG   Zophobihabitans entericus: IPMB12_01170
Entry
IPMB12_01170      CDS       T06493                                 
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
  KO
K04763  integrase/recombinase XerD
Organism
orb  Zophobihabitans entericus
Brite
KEGG Orthology (KO) [BR:orb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:orb03036]
    IPMB12_01170 (xerD)
Chromosome and associated proteins [BR:orb03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    IPMB12_01170 (xerD)
SSDB
Motif
Pfam: Phage_integrase Phage_int_SAM_1 Phage_int_SAM_4 DUF7149
Other DBs
NCBI-ProteinID: QIQ20409
UniProt: A0A6G9I9A0
LinkDB
Position
249255..250160
AA seq 301 aa
MSQDTVLIEQFLDSLWLERNLAENTVQSYKLDLQALVKSLQRQEETILSAQTMHLQDFLM
QRVQEGYKATSSARLLSAIRRLYQYLYREKYREDDPTAPLASPKLPKNLPKDLTENQVEA
LLQAPSTAEPIDPVELRDKAMLEVLYATGLRVSELVGLEINDVSIRQGVIRIIGKGNKER
LVPLGEEAIYWLEYYFKYGRDDLLKEGPVDVLFPSRLGKKMTRQTFWHRIKYYAILAEIN
VEALSPHVLRHAFATHLLNHGADLRVVQMLLGHSSLSTTQIYTHVATERLKKLHQQHHPR
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atgtcgcaggataccgtgttaattgagcaatttctggattcgctctggctggaacgtaat
ctggcagaaaatacggtgcaatcctataaactggacttgcaggctttagttaaatcacta
cagcgtcaggaagagactattctttctgcccaaaccatgcatctgcaagattttttgatg
cagcgagtacaggaaggttataaggcaacaagttctgcccgtctgctcagtgcgattcgc
cgtctttatcaatatctctaccgggaaaagtaccgggaagatgatcctaccgcaccgctg
gcatcacctaaactccctaaaaatctacctaaagatctaacagaaaatcaggttgaagcc
ctattacaggcaccaagtacagcggaaccaatcgatccggttgaactgagagacaaagcc
atgctggaagtactttatgctaccgggctgcgtgtttctgaactggtcgggctagaaata
aatgatgtgagtattcgtcagggcgtgattcggattatcggtaaaggtaataaagagcgc
cttgttcctttaggtgaagaggcgatctactggctggaatattatttcaaatatgggcgc
gatgacctgctgaaagaaggcccggtcgatgttttattccctagccgtttaggtaaaaaa
atgacccgtcagactttctggcatcgtataaaatattatgccatactagctgagataaat
gttgaagcactttcacctcatgttttacgtcacgcatttgctacccatctgttaaatcat
ggtgcagacttgcgcgttgtacaaatgttacttggtcatagcagcttatcaaccacacaa
atttatacccatgtagcaacggagagactcaagaagctacatcaacagcatcacccacgc
gcatag

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