Zophobihabitans entericus: IPMB12_01585
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Entry
IPMB12_01585 CDS
T06493
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
orb
Zophobihabitans entericus
Pathway
orb03030
DNA replication
orb03410
Base excision repair
orb03420
Nucleotide excision repair
orb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
orb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IPMB12_01585 (polA)
03410 Base excision repair
IPMB12_01585 (polA)
03420 Nucleotide excision repair
IPMB12_01585 (polA)
03440 Homologous recombination
IPMB12_01585 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
orb03032
]
IPMB12_01585 (polA)
03400 DNA repair and recombination proteins [BR:
orb03400
]
IPMB12_01585 (polA)
Enzymes [BR:
orb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IPMB12_01585 (polA)
DNA replication proteins [BR:
orb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IPMB12_01585 (polA)
DNA repair and recombination proteins [BR:
orb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
IPMB12_01585 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IPMB12_01585 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QIQ20486
UniProt:
A0A6G9I8E8
LinkDB
All DBs
Position
complement(343246..346053)
Genome browser
AA seq
935 aa
AA seq
DB search
MKDSSPIILIDGSSYLYRAFFACPPLTNSKGEPTGAIFGVINMLRSLINQYKPKHIAVVF
DAKGGSFRNELYKEYKATREAMPDDLILQVEPIHKIITAMGLPLFCIEGVEADDVIGTIA
LHCEQRGIDVLISTGDKDMAQLVSDKITLINTMTNSVLTPQGVVDKFGVPPELIIDFLAL
MGDKSDNIPGVPGIGEKTASALLSALPGLKSIYENIDEVANLSIRGAKSLKEKLLTNKDE
AMLSYKLATIKTDIELDITAEQLQPKVPDMSQLSELFAYYGFNRWIADINNNKFINLNGD
GAEPPAPVAAQPAKNNVTHHQPESTVKHSMIKVEQGYETILTHKELDKWLDQLAKAEQFA
FDTETNSLNSTDTLLIGLSFCIEPGKAAYLPVNHFYLGVPDQLPLGEVIAKIKPIMENEK
IKKIGQNLKFDCNVLAQYGVIVKGLTYDTMLESYILNSNNRHDMDTLALKHLNHQTITYT
ELTKKGNQQFSIDEIEIEEVSKYAAEDADVTLQLHHSMWQQLKADSKLADIFTNIEMPLV
EVLSKMETTGVLINKELLIEYSAELAEKLKQLEEEMYLLAGEEFNPASPKQLQKILFEKL
SLPVIKKTPKGDPSTNEEVLTELAHDFELPKIILKYRGLAKLKNTYTDKLPLMVSPKDHR
IHTSYNQTGTITGRLSSSDPNLQNIPVRNEEGRKIRQAFIAPKGYKIISADYSQIELRIM
AHLSKDKGLLAAFEQGKDIHRVTAAETLGIPEDTVTSEQRRNAKAVNFGLIYGMSAFGLA
RQLGIARKEAQFYIDRYFERYPGIQTYMEETRQLATEQGYVETVSGRRLYLPSIKSSSAI
ERKGAERAAINAPMQGTAADIIKTAMIDINKWIEQRNNDDIRMIMQVHDELVFEVKESLV
EQISKEIKDKMENCFKLSTPLKVDAGIGDNWDEAH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgaaagattcttcccctattattctgatcgacggttcatcttatctttaccgtgcattc
tttgcctgccctccactgactaactctaaaggtgaaccaactggtgctatcttcggcgtt
atcaatatgctaagaagtttaatcaatcaatataaacctaaacatattgccgttgtcttt
gatgctaaaggtggttcatttagaaatgagctttacaaagaatataaagcaacgcgtgaa
gcaatgcctgacgatcttattctacaggttgaacctattcataaaataataactgctatg
ggtctaccactcttttgtattgaaggtgttgaggcagatgatgttattggtactatcgca
ttacactgtgaacaaagaggtattgatgtacttatcagtaccggtgataaagatatggca
cagctggtatctgacaaaattactctaatcaataccatgactaattcagtactgactcca
caaggtgtagtcgataaatttggcgtgccaccagaacttatcatcgatttcctggccttg
atgggtgataaatcagataatattccgggcgtacctggtattggcgaaaaaaccgcctca
gctttactcagtgcactaccgggtttgaaaagtatttatgaaaatattgatgaagtagct
aatctgtctatccgcggtgccaaatccttaaaagaaaaattactgactaataaagatgaa
gcaatgctctcttataaactggcaacaataaagacagatattgaactggatattacagct
gagcaacttcagccaaaagtgccggatatgagtcaactaagtgaattgtttgcttattat
ggatttaatcgctggatcgctgatatcaataataataaatttatcaatctgaatggtgat
ggtgcagagccaccagcaccagtagctgcgcaaccagctaaaaataatgtaactcatcac
caacctgaatctactgttaaacacagcatgattaaagttgaacaaggttatgaaactatt
ttaacccataaagagttggataaatggttagatcaactagctaaagcagagcagtttgct
tttgacacagaaactaacagcttaaatagtacggatactttactgattggactatcattt
tgtattgaaccgggtaaagctgcctacctgccagttaatcatttttatttaggggtccct
gatcagctaccacttggtgaagtaatagcaaaaattaaacctattatggaaaatgagaag
atcaaaaaaataggccaaaatttaaaatttgattgcaatgttctggcgcaatatggagtg
attgttaaaggcctgacttatgacactatgcttgagtcttacatattaaatagtaataac
cgccatgatatggataccttagcacttaaacatcttaatcatcaaaccattacttatact
gaactcaccaaaaaaggtaatcaacagttctcaattgatgaaatagaaattgaagaagtc
agcaaatacgctgcagaagatgctgatgtaacattacagctgcatcatagtatgtggcag
cagcttaaagctgacagtaaactggctgatatctttaccaatatagaaatgccactggtt
gaagtattatctaaaatggaaaccacaggtgtactgattaacaaagaacttctgattgaa
tactccgctgagctggctgaaaaacttaagcaattagaagaagagatgtaccttctggca
ggtgaagaatttaatccggcttcaccaaaacagttacaaaaaatcttatttgaaaagtta
agtcttccagtaattaaaaaaacacctaaaggcgatccttctaccaatgaagaggtatta
actgagttagctcatgactttgaattaccgaaaattattttaaaatatcgtggcttagct
aagttaaaaaatacttatacagataaattaccattaatggtaagccctaaagatcaccgt
attcatactagttataatcaaaccggtacaattaccggacgcctctcttcgagcgatcct
aacttacaaaatatcccggtcaggaatgaagaaggtcgtaaaattcgtcaggcttttatc
gcaccaaaaggatataagatcatctctgccgactattcacaaattgagctgcgtattatg
gcacatctgtctaaagataaaggcttgctggcagcttttgaacaaggtaaggatattcat
cgcgtaactgcagcggaaacactgggaataccggaagatacagtcacatctgaacaacgc
cgtaatgctaaagccgttaactttggactcatttatggtatgagtgcctttgggctggcc
agacaactgggaattgcacgtaaagaagcacaattctatatcgaccgatactttgaacgc
tacccgggaatccaaacttatatggaagaaaccagacaactggcaacagaacaaggttat
gttgaaacagtatctggtcgtcgcttatatctgccaagcataaaatcaagcagtgctatt
gaaagaaaaggcgctgaacgggcagctattaacgcaccaatgcaaggtactgcagcagat
atcataaaaacagccatgattgatattaataaatggatagaacagagaaataacgacgat
atccgtatgatcatgcaggtacacgatgagctggtttttgaagtaaaagagtcactggtt
gaacaaatatctaaagaaatcaaagacaaaatggaaaactgctttaaactctctacccct
ttaaaagtcgatgccggaattggtgataactgggatgaagcccactaa
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