Zophobihabitans entericus: IPMB12_01860
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Entry
IPMB12_01860 CDS
T06493
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
orb
Zophobihabitans entericus
Pathway
orb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
orb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IPMB12_01860 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
orb03019
]
IPMB12_01860 (groL)
03110 Chaperones and folding catalysts [BR:
orb03110
]
IPMB12_01860 (groL)
03029 Mitochondrial biogenesis [BR:
orb03029
]
IPMB12_01860 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
orb04147
]
IPMB12_01860 (groL)
Enzymes [BR:
orb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
IPMB12_01860 (groL)
Messenger RNA biogenesis [BR:
orb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
IPMB12_01860 (groL)
Chaperones and folding catalysts [BR:
orb03110
]
Heat shock proteins
HSP60 / Chaperonin
IPMB12_01860 (groL)
Mitochondrial biogenesis [BR:
orb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
IPMB12_01860 (groL)
Exosome [BR:
orb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
IPMB12_01860 (groL)
Exosomal proteins of other body fluids (saliva and urine)
IPMB12_01860 (groL)
Exosomal proteins of breast cancer cells
IPMB12_01860 (groL)
Exosomal proteins of colorectal cancer cells
IPMB12_01860 (groL)
Exosomal proteins of bladder cancer cells
IPMB12_01860 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QIQ20533
UniProt:
A0A6G9I8J3
LinkDB
All DBs
Position
complement(402282..403928)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARIKMLKGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDTAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVTAAVEELKKLSVPCSDSKAIAQVGTISANSDETVGKLIAEAMEKVGKEGVITVEDG
TGLEDELDVVEGMQFDRGYLSPYFINKPETATVELESPYILLVDKKISNIRELLPVLEGV
AKAGKSLLIVAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTAGTV
ISEEIGLELEKATLEDLGQAKRVVINKDNTTIIDGIGDQKLIEGRVTQIRQQIEEATSDY
DKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVDDALHATRAAVEEGVVAGGGVALV
RVAGTLANLKADNEDQNVGIKVALRAMESPLRQIVTNCGEEASVVANAVKAGKGNYGYNA
STEEYGDMIAMGILDPTKVTRSALQYAASVAGLMITTECMITDLPKDDKVDLGGAGGMGG
GMGGMGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgttaaatttggtaacgacgcacgcattaaaatgcttaaaggtgta
aatatccttgctgatgcagtaaaagtgactttaggtcctaaaggtcgtaacgttgtttta
gacaaatcatttggtgctccaaccattactaaagacggtgtttctgttgcacgtgaaatc
gaattagaagataaattcgaaaacatgggtgcacaaatggttaaagaagtggcatcaaaa
gcaaatgatacagctggtgatggtacaacaactgcaactgttctggctcaggctattgtt
aatgaaggcttaaaagcggttgccgctggcatgaatccaatggatttaaaacgtggtatt
gataaagcagttactgccgcagttgaagaacttaaaaaactttctgttccatgttcagat
tcaaaagcaatcgcacaagtaggtactatttcagctaactcagatgagactgttggtaag
ctaattgctgaagcgatggaaaaagtaggtaaagaaggcgttatcactgttgaagatggt
acaggccttgaagatgaattagatgttgttgaaggtatgcaatttgaccgtggttattta
tctccatacttcatcaacaagccagaaacggcaactgttgaactagaaagtccatacatc
ctattagttgataaaaaaatctctaatatccgtgagcttctgccagttcttgaaggtgta
gctaaagcaggtaaatcactactgatcgttgctgaagacgttgaaggtgaagcactagca
acactcgttgtgaacacaatgcgcggcatcgtgaaagtggctgctgttaaagcacctggt
tttggtgatcgtcgtaaagcaatgttacaagacatcgcaatcttaactgctggtactgtg
atttctgaagagattggtcttgagcttgaaaaagcaacgcttgaagatttaggtcaggct
aaacgtgttgtaatcaataaagacaacacaactatcatcgatggtattggcgatcaaaaa
cttatcgaaggccgcgtaacgcaaattcgtcagcaaatcgaagaagcaacatcagactac
gataaagagaaacttcaagaacgtttagctaaactagctggtggtgttgcagtgatcaaa
gtcggtgcagcaactgaagttgaaatgaaagagaagaaagcacgtgttgacgatgcgtta
cacgcaactcgcgcagcagttgaagagggtgtggttgctggtggtggtgtggcacttgtt
cgtgttgctggtactcttgctaacttaaaagctgataacgaagatcaaaacgtaggtatt
aaagttgctctgcgtgcgatggaatccccactacgtcaaatcgtgactaactgtggtgaa
gaagcttctgttgttgctaacgcagttaaagcaggcaaaggtaactacggttataacgct
tcaactgaagagtatggcgatatgattgcaatgggtatcttagatccaactaaagtaact
cgttcagcattacaatacgcagcatctgttgcaggtctgatgattacaactgaatgtatg
attacagatcttcctaaagatgataaagtagacctgggcggcgctggtggtatgggtggc
ggcatgggtggcatgggaatgatgtaa
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