Zophobihabitans entericus: IPMB12_02710
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Entry
IPMB12_02710 CDS
T06493
Name
(GenBank) rRNA large subunit pseudouridine synthase E
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
orb
Zophobihabitans entericus
Brite
KEGG Orthology (KO) [BR:
orb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
orb03009
]
IPMB12_02710
Enzymes [BR:
orb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
IPMB12_02710
Ribosome biogenesis [BR:
orb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IPMB12_02710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF3440
Motif
Other DBs
NCBI-ProteinID:
QIQ20684
UniProt:
A0A6G9IAD5
LinkDB
All DBs
Position
complement(595317..595880)
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AA seq
187 aa
AA seq
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MSSIIALNKPFGVISQFSEHEKHPTLKNYVDLPGFYPAGRLDTDSEGLLLLTNDGKLQAK
IADPKFKQAKTYWAQVEGIVTDEAISLLQKGIALKEFTTAPAKASVIPEPAKLWQRDPPI
RERKSIPTSWISLTIKEGKNRQVRRMCAHVGFPCLRLVRVQIGNINVFDIQLPLGQWQYI
SATDVLK
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaattattgcgcttaacaagccttttggtgtgatcagccagttctcagaacat
gaaaaacatccaaccttaaaaaactatgtagatttaccgggattttaccctgccggacgt
ttagatactgacagtgagggactattattactcactaatgatggtaaattgcaggctaag
attgccgatcctaaatttaaacaggcaaagacttactgggctcaggtagaggggattgta
acagacgaagcaatctctctgctgcaaaaggggatagccctcaaagaattcactacagcg
ccagctaaagccagtgtcattcctgaaccagcaaaactctggcaacgagatcctcctatc
cgagaaagaaaaagtattccaacctcatggattagcctgactattaaagaaggcaaaaac
cgtcaagtcagacgtatgtgtgctcatgtaggattcccctgtttacgtttagtccgggtc
cagatcggtaacattaatgtttttgatatacagttaccacttggccaatggcaatatatc
tctgcgaccgatgtcctaaaataa
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