Zophobihabitans entericus: IPMB12_04315
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Entry
IPMB12_04315 CDS
T06493
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
orb
Zophobihabitans entericus
Pathway
orb00470
D-Amino acid metabolism
orb00550
Peptidoglycan biosynthesis
orb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
orb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IPMB12_04315 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IPMB12_04315 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
orb01011
]
IPMB12_04315 (murD)
Enzymes [BR:
orb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
IPMB12_04315 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
orb01011
]
Precursor biosynthesis
Amino acid ligase
IPMB12_04315 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_7
DUF2642
Motif
Other DBs
NCBI-ProteinID:
QIQ20970
UniProt:
A0A6G9IBL2
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Position
944480..945802
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AA seq
440 aa
AA seq
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MNYQGKNIVIIGLGITGLSCVNYFLAQGVIPKVIDTRTEPAGLDKLDKRVAYHLGSLRLD
WLLEADLIVSSPGIALATPELQKAAEQGVEIVGDIELFCREVNKLGNKKIAAITGANGKT
TVTTLVGEIVKASGISVGVGGNIGQDALSLLEHDYDIYVLELSSFQLETTSSLKATVATI
LNITEDHMDRYPLGIAQYTAAKQRIYHQAMHCLINADDPLTVPETGFSDRCIEFGLHQGD
YSLDTRYQHLLVDGEAVFDTADMQLIGLHNYTNALAALAIADKLGIDRAVTYSVLKQFKG
LPHRFELVHEHRGVRWINDSKATNVGSTEAALRSLVYQGHLYLLLGGDGKAADFSPLIPY
LQKDNITIYSFGRDRQLLAKLKPESTVVVETMAEAMKEIATKVKPDDVVLLSPACASLDQ
FKNYVERGNVFAQLAKEFDA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaattatcaaggcaaaaatatcgttatcattgggctgggaatcacaggactttcttgt
gtaaactattttctggcacaaggcgttatccctaaagtgatagacacacgcacagaacca
gctgggctggataaattagataaacgtgttgcatatcatttaggtagtttacgtttagac
tggttactggaagctgacttaattgtatcgagtccgggtattgctttagcaacaccagag
ctacaaaaagcggcagagcaaggcgtagaaatcgttggtgatattgaattgttttgtcgt
gaagtgaataaactgggtaataaaaaaattgctgcgattaccggcgctaatggtaaaacg
acggtcactacactagttggtgagattgtcaaagcttcaggcatttcggttggtgttggt
ggtaatatcggtcaggacgccttatcgctgcttgaacacgattatgatatttatgtactt
gaactctccagttttcaactggagacaaccagcagcttaaaagctaccgtcgcgactatt
ttaaatattactgaagaccatatggatcgctatccgttaggtattgctcagtataccgcc
gccaaacaacgaatttaccatcaggcgatgcattgtttgatcaatgctgatgacccatta
actgtcccggaaacgggttttagcgatcgttgtatcgaatttggtctgcatcagggtgat
tactcactggataccagataccagcatttactggttgatggagaagcagtgtttgatacg
gctgatatgcaacttattggtttacataactacaccaatgctttagctgctctggcgatt
gcggataaattaggtattgatcgtgctgtaacttattcggtattaaaacaatttaaaggc
ttaccgcatcgctttgagcttgtacatgagcatcgtggtgtgcgctggattaacgactct
aaggcaaccaatgtaggtagtactgaggccgctttgcgtagcttagtttatcaaggtcat
ctctatttgctacttggtggtgatggtaaagcagcggatttttctccactgattccttat
ttacaaaaagacaatatcacgatttatagttttggccgtgatcgtcaattgctggcaaaa
ttaaaaccagaaagtacagtcgtagttgaaactatggctgaagcgatgaaagagatcgca
accaaagtgaaaccggatgacgtggtgctgttatcgccggcttgtgccagtttagatcaa
tttaaaaattatgtagagcggggcaatgtatttgctcagttggcaaaggaatttgatgca
tga
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