Zophobihabitans entericus: IPMB12_04860
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Entry
IPMB12_04860 CDS
T06493
Name
(GenBank) DNA-binding transcriptional repressor
KO
K02468
DeoR family transcriptional regulator, glucitol operon repressor
Organism
orb
Zophobihabitans entericus
Brite
KEGG Orthology (KO) [BR:
orb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
orb03000
]
IPMB12_04860
Transcription factors [BR:
orb03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
IPMB12_04860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
GntR
HTH_Mga
Fe_dep_repress
MarR_2
HTH_20
HTH_5
MarR
TrmB
SpoIIID
HTH_Crp_2
DUF7698
Put_DNA-bind_N
FeoC
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QIQ21069
UniProt:
A0A6G9IB73
LinkDB
All DBs
Position
complement(1075371..1076141)
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AA seq
256 aa
AA seq
DB search
MKVKERQAAILNYLQSNGNAMVDQLAEYFNTTGTTIRKDLTQLSDNGLVIRTYGGAILNK
EVGDQPIDHKTYINTSAKKKIAEEAAKLIHEGDSLIFDAGSTVAQMIPMLAKFDNLTIMT
NSLHMINELVTVDNNQTFILSGGTFRRKSASFHNSNTIAEAEFSQYAFDKLFMGADGVDL
TAGVTTFNESCNGSVAMCKAAAKVILLVDSSKFGRRGPNVVCSLKTVHTIITDDQVDPKY
VSTFNKLGINVIQVKI
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaaaagagagacaagcagcaattttaaattacctgcagtccaacggtaatgcg
atggttgatcagttagcggaatattttaatacgaccggtaccacgatccgtaaagacctg
acacaactatctgataacgggctggtgattagaacttatggcggtgctatcttgaataaa
gaagttggcgatcaacctattgaccataaaacttacatcaatacttcagctaaaaagaaa
attgcagaagaagcggccaaattaattcatgaaggtgattctctgatttttgatgccggc
agcactgtggcacaaatgattccaatgctggctaaatttgataatctgactattatgacc
aacagcctgcatatgattaatgagctggtgacggttgataacaatcagacctttattctt
tctggtggtactttccgtcgtaaatctgcttctttccataatagtaataccatagctgaa
gcagagtttagtcaatacgcatttgataaactatttatgggggctgatggtgtggattta
acagcaggtgtgaccacatttaatgagagctgtaatggtagtgtggcaatgtgtaaagct
gccgcaaaagttatcctgctggttgactcttcaaaatttggtcgtcgtgggccaaatgtg
gtttgctcactaaaaactgtccataccattattacagatgatcaggttgatccaaaatat
gtgagtactttcaataagttagggattaatgtgattcaggtgaaaatttaa
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