Zophobihabitans entericus: IPMB12_05010
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Entry
IPMB12_05010 CDS
T06493
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
orb
Zophobihabitans entericus
Pathway
orb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
orb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IPMB12_05010 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
orb03400
]
IPMB12_05010 (mutM)
Enzymes [BR:
orb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
IPMB12_05010 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
IPMB12_05010 (mutM)
DNA repair and recombination proteins [BR:
orb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IPMB12_05010 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QIQ21090
UniProt:
A0A6G9IBY2
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All DBs
Position
1104649..1105458
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AA seq
269 aa
AA seq
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MPELPEVETSRRGILPYIKGQKIADIVIRQPQLRWLVPEEISEAKGQLIVDVHRRAKYLQ
LELTHGWIVIHLGMSGSLRILTTMQPPQKHDHIDLILENGTVLRYTDTRRFGAWLWAEKL
SDISQLKHLGPEPLSNDFTAEYLQAQVASKKIPVKNWIMDNHVVVGVGNIYASESLFMAK
VNPNRPVNTLKKQEITRLVKAIKEVLAKSIEQGGTTLKDFLQSDGKPGYFAQQLQVYGRH
NEPCLLCKTVIKSQKIGQRNTFFCENCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaggttgagacgagtcgacgagggattttaccttacattaaagga
caaaaaattgcggatattgttattcgtcagcctcaattacgttggctggtaccagaagag
atttctgaagccaaaggccagctcattgttgatgttcatcgcagagcaaaatatctacag
ctggaattgactcatggctggattgttatccatctagggatgtcaggcagtttgcgtatt
ttaactacgatgcagccaccacaaaagcatgaccatatcgatcttattttagaaaatggt
actgttttgcgttataccgataccagacgttttggtgcatggctttgggccgaaaagcta
tctgatatttctcaacttaaacatttagggccagagcctctcagtaatgatttcactgct
gaatacttacaggcacaagttgccagtaaaaagattccggtaaaaaattggatcatggat
aatcatgttgtagtaggtgttggtaatatttatgccagtgaatcactatttatggctaaa
gtgaatcctaaccgaccagttaatactttgaaaaaacaagagataactcgtttagtcaaa
gcgattaaagaggtcttagctaaatcgattgagcagggtggaacaacgctaaaagacttt
ttacagtcagatggtaagcccggatattttgctcaacagttacaagtatatggtcgacat
aatgagccctgtttgctctgtaaaacagtgattaaatctcagaaaataggacagcgtaat
acttttttttgtgagaactgtcaaaaataa
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