Zophobihabitans entericus: IPMB12_05435
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Entry
IPMB12_05435 CDS
T06493
Symbol
fis
Name
(GenBank) DNA-binding transcriptional regulator Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
orb
Zophobihabitans entericus
Brite
KEGG Orthology (KO) [BR:
orb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
orb03000
]
IPMB12_05435 (fis)
03036 Chromosome and associated proteins [BR:
orb03036
]
IPMB12_05435 (fis)
03400 DNA repair and recombination proteins [BR:
orb03400
]
IPMB12_05435 (fis)
Transcription factors [BR:
orb03000
]
Prokaryotic type
Helix-turn-helix
Other families
IPMB12_05435 (fis)
Chromosome and associated proteins [BR:
orb03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
IPMB12_05435 (fis)
DNA repair and recombination proteins [BR:
orb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
IPMB12_05435 (fis)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
Phage_NinH
HTH_30
HTH_28
INT1_R3
HTH_50
UPF0175
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
QIQ21169
UniProt:
A0A6G9IBH1
LinkDB
All DBs
Position
complement(1208041..1208337)
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AA seq
98 aa
AA seq
DB search
MPEQRVTADALKFTTVNSQDKITQKPLRDSVKQALRNYLSQLNGQDPTDLYALVLAEVEH
PFLDMVMQYTRGNQTRAANMLGINRGTLRKKLKQYGMS
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacaacgtgttacagctgatgctttaaaattcactactgtgaattctcaagat
aagatcactcagaaaccacttcgagattcagtgaaacaagcattaagaaattacttatca
cagttaaatggacaagatccaacagacctttatgctttagttcttgcagaggttgagcac
ccattccttgatatggtaatgcaatatactcgtggcaaccaaactcgtgctgctaacatg
cttggcatcaaccgtggtactttacgtaaaaaattaaaacaatacggtatgagttaa
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