Zophobihabitans entericus: IPMB12_05970
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Entry
IPMB12_05970 CDS
T06493
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
orb
Zophobihabitans entericus
Pathway
orb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
orb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IPMB12_05970 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
orb01007
]
IPMB12_05970 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
orb03016
]
IPMB12_05970 (aspS)
03029 Mitochondrial biogenesis [BR:
orb03029
]
IPMB12_05970 (aspS)
Enzymes [BR:
orb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
IPMB12_05970 (aspS)
Amino acid related enzymes [BR:
orb01007
]
Aminoacyl-tRNA synthetase
Class II (A)
IPMB12_05970 (aspS)
Transfer RNA biogenesis [BR:
orb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
IPMB12_05970 (aspS)
Prokaryotic type
Other AARSs
IPMB12_05970 (aspS)
Mitochondrial biogenesis [BR:
orb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
IPMB12_05970 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
QIQ21271
UniProt:
A0A6G9IAM0
LinkDB
All DBs
Position
1334526..1336286
Genome browser
AA seq
586 aa
AA seq
DB search
MRTIYCGQLNASHIGQEVTLCGWVNKRRDLGGMIFIDMRDREGLVQVFFDPDYKEAFTLA
SELRNEFCIQIQGKVRARPEGQLNKEMKTGEVEVLATALTIINRSEVLPLDFNQNNTEEQ
RLKYRYIDLRRPEMTAIFKTRARVTAFVRRFMDEHGFLDVETPMLTKATPEGARDYLVPS
RVHKGEFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSFMT
AEQVREIMEELIRKLWLEIKGVDLGTYPVMTFAEAMRRYGSDKPDLRNPLEIIDVADLVK
DVEFKVFSGPANDPKGRVALLCVPGGAELSRKHLDDYAQFITVYGAKGLAWMKVNDRAAG
PEGVQSPVAKFFSAEQIEAILTRANAKNGDILLFGADSYKVVSDALGALRLKVGKELKIT
DEKKWAPLWVIDFPMFEETEDGLSAMHHPFTSPKDFTPEQLKASPVEAVANAYDMVINGY
EVGGGSVRIHRNEMQQTVFSILGISEQDQREKFGFLLDALKYGTPPHAGLAFGLDRLTML
LTGTDNIRDVIAFPKTTAAACLLTDAPSPANPAALQELGIEVSKKA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaatttattgtggtcagttaaatgcttctcatattggtcaggaagtcacatta
tgtggttgggtgaataaacgccgcgatctgggtggaatgatctttattgatatgcgagac
agagaagggctggtacaggtcttttttgacccggattataaagaagcgtttactttagcc
tcagagttacgcaatgaattctgtattcaaattcagggtaaagttcgtgccagaccagaa
ggccagttaaataaagagatgaaaacaggtgaagttgaagtactggctactgctcttacc
atcatcaaccgttcagaagttctaccactggacttcaatcaaaacaatactgaagagcaa
cgcctaaaatatcgttatatcgatttacgtcgtccggaaatgaccgctatttttaaaact
cgtgctcgtgttaccgcttttgtacgtcgttttatggatgaacatggtttcttagatgtg
gaaacgccgatgttaactaaggctacaccagaaggtgcgcgtgactatttagtcccaagc
cgcgtacataaaggtgaattctatgcgttgccacagtcaccacaattatttaaacagtta
ctgatgatgtctggctttgaccgctattatcaaattgttaagtgcttccgtgatgaagat
ttgcgcgcagatcgtcagccagagtttacccaaatcgatgttgaaacttcttttatgacg
gctgagcaggtcagagaaattatggaagagctaatccgtaaactttggttggaaatcaaa
ggggttgatttaggcacgtatccggtgatgacatttgctgaagcaatgcgccgttatggt
tctgataaaccagacttacgtaacccacttgaaattatcgatgtcgcggatttagtgaaa
gatgttgaatttaaagtgttctctggtccggcaaacgatccaaaaggtcgtgtagcactg
ctttgtgtaccgggtggggctgagcttagccgtaagcatttagatgattatgcgcaattt
attactgtctatggagcgaaaggtttagcatggatgaaagtgaatgatcgtgcagctggt
cctgaaggtgtacaaagtccggtagctaaattcttctcagctgagcaaattgaggctatt
cttacccgtgctaatgctaaaaatggtgatattttactgtttggtgcagacagctataaa
gtggtgagtgatgcacttggtgcgctgcgtctgaaagtcggtaaagagttaaaaattact
gatgaaaagaaatgggcgccactttgggttatcgacttccctatgtttgaagaaaccgaa
gatggtttaagtgcaatgcaccatccgtttacgtcaccaaaagattttactccagaacag
ctgaaagctagtccggtagaagccgtagccaatgcttatgatatggtgatcaatggttat
gaagtaggtggtggttctgtacgtattcatcgcaatgaaatgcaacaaaccgtatttagt
attttaggcattagtgaacaggatcaacgtgagaaatttggtttcttacttgatgcctta
aaatatggtacaccaccacatgcaggacttgcttttggtctggatcgtttgactatgctt
ttaacaggtacggataatattcgtgatgttattgcgttcccaaaaacaaccgctgcggca
tgtttattaacggatgcgccaagtccggctaatccggctgctttacaggaacttgggatt
gaggtttctaaaaaagcatag
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