Zophobihabitans entericus: IPMB12_06000
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Entry
IPMB12_06000 CDS
T06493
Symbol
ruvC
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
orb
Zophobihabitans entericus
Pathway
orb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
orb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IPMB12_06000 (ruvC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
orb03400
]
IPMB12_06000 (ruvC)
Enzymes [BR:
orb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
IPMB12_06000 (ruvC)
DNA repair and recombination proteins [BR:
orb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IPMB12_06000 (ruvC)
RecFOR pathway proteins
IPMB12_06000 (ruvC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
QIQ21276
UniProt:
A0A6G9IAM4
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All DBs
Position
1340843..1341388
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AA seq
181 aa
AA seq
DB search
MTIILGIDPGSRLTGYGVIRHTGRKLEYLGSGCIKTAVDDLPTRLKRIYAGVTEIILQFQ
PDEFAIEQVFMARNADSALKLGQARGAAIVAAVNQDLPIFEYAARQVKQSVVGTGAADKS
QVQHMVKTLLKLPASPQADAADALAIAITHTHMSQNLVKMSENRLALARKRIIDESQYSK
K
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcattttaggtattgacccaggttcccgtttgacgggatacggggtcattcgt
cacaccggacgtaaattagagtatttaggcagtggttgtattaaaaccgctgttgatgat
ttacctacgcgcctgaagcgaatttatgctggggtgactgaaattattttacaatttcaa
cctgatgagtttgccattgaacaggtatttatggcgcgtaacgctgattcagctctaaaa
cttggacaggcgagaggggcggcgatcgttgctgcggtaaatcaggatttacctattttt
gagtatgctgcgcgtcaggtgaaacagagcgtggttggaacaggggcggcagataagtct
caggttcagcatatggtaaaaacactgttaaagttacccgccagcccgcaagccgatgcg
gctgatgcgttggcaattgctatcacccacacgcatatgagtcaaaatttagtgaagatg
agtgaaaatcgtttggcgttagcccgtaaacgaattattgatgagtcacaatatagtaag
aaatag
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integrated database retrieval system