Zophobihabitans entericus: IPMB12_06455
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Entry
IPMB12_06455 CDS
T06493
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
orb
Zophobihabitans entericus
Brite
KEGG Orthology (KO) [BR:
orb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
orb03009
]
IPMB12_06455 (rimO)
Enzymes [BR:
orb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
IPMB12_06455 (rimO)
Ribosome biogenesis [BR:
orb03009
]
Prokaryotic type
ribosomal protein modification factors
IPMB12_06455 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Methyltransf_2
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
QIQ22418
UniProt:
A0A6G9IDV7
LinkDB
All DBs
Position
complement(1434042..1435364)
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AA seq
440 aa
AA seq
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MKNLSPTIGFVSLGCPKNLVDSERILTELRTQGYQVVPSYDNADLVIVNTCGFIDSAVQE
SLEAIGEALNENGKVIVTGCLGAKEDQIRALHPKVLEISGPHSYEQVLTHVNKYVPKPEY
NPFISLIPEQGVKLTPKHYAYLKISEGCDHRCTFCIIPSLRGDMESRPIGGILDEAKRLV
DSGVKELLVIAQDTSAYGKDIKNRTGFWNGMPVKSDLVTLCQQLSNLGVWVRLHYVYPYP
DVDHLIPLMAEGKVLPYLDVPLQHASPKILKSMKRPGTIERTLERIQKWREICPEITLRS
TFIVGYPGETEEDFQLLLDFLAKARLDRVGCFTYSPVEGAAANQLPDQVPEDVKQERFHR
FMQLQQQISAEKLQEKIGKILPVIIDEVDEEGAIGRCMADAPDIDGAVYLNGENKVKVGD
IVQVKIENADEYDLWGSKIA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacttatccccaacgattggctttgtgagcttaggctgtcctaaaaatctggtt
gattcagagcgaattttaactgagctgcgcacacaaggttatcaggttgtaccaagttat
gacaatgctgatctggtgattgtaaacacctgcggctttattgatagtgcagtacaagaa
tcactggaagctattggtgaagcgctaaatgaaaacggtaaagtgattgtcactggctgt
cttggtgccaaagaagatcaaattcgggctttacatccaaaagtgctggaaatttctggc
cctcatagttacgaacaagttttaactcatgtgaataaatatgttcctaaaccagaatat
aatccatttattagtctgattccggaacaaggtgttaagctcacacctaagcattacgct
tacttaaaaatctcggaaggttgtgatcatcgttgtacgttctgtatcattccatcacta
cgtggagatatggaaagccgaccaattggtggcatactggatgaagcaaaacgtctggtt
gatagcggcgtcaaagaactacttgttatcgctcaggatacctctgcttatggtaaagat
attaaaaatcgtaccggattttggaacggcatgccggtgaaaagtgatttagtcacactc
tgtcagcagttatcaaacttaggcgtctgggtacgtttacattatgtttatccgtatccg
gatgtggatcatttaattcctcttatggccgaagggaaagtgctgccctatttagatgtg
ccgctacaacatgccagccctaaaatcttaaaatcgatgaaacgaccaggcacaattgaa
agaacgcttgaacgtattcaaaaatggcgtgaaatttgcccggaaattactctgcgctca
acatttatcgtcggctatccgggagaaactgaagaagacttccagctattgctcgacttc
ttagctaaagcccgccttgatcgcgtaggttgtttcacttatagtccggttgaaggtgct
gctgctaatcagttaccagatcaagtaccggaagatgttaagcaggaacgtttccaccgc
tttatgcaactgcaacaacaaatttcggcagaaaaactacaagagaagatcggtaaaatt
ctgccagtgattattgatgaagtagatgaagaaggtgcaatcgggcgctgtatggctgat
gcgcctgatattgatggtgcagtttacctcaatggtgaaaataaagtgaaagtgggtgac
atcgtacaagttaaaattgaaaacgcagatgaatacgatctgtggggctcaaaaatcgct
taa
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