KEGG   Zophobihabitans entericus: IPMB12_06470
Entry
IPMB12_06470      CDS       T06493                                 
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
Organism
orb  Zophobihabitans entericus
Brite
KEGG Orthology (KO) [BR:orb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:orb03009]
    IPMB12_06470 (srmB)
Enzymes [BR:orb01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     IPMB12_06470 (srmB)
Ribosome biogenesis [BR:orb03009]
 Prokaryotic type
  rRNA helicases
   IPMB12_06470 (srmB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 PhoH Cas3-like_C_2
Other DBs
NCBI-ProteinID: QIQ21363
UniProt: A0A6G9IAX1
LinkDB
Position
complement(1437526..1438842)
AA seq 438 aa
MSEITDFSSLELDESLLNALEDKGFKKPTVIQAQTIPVALDAKDIMGSAPTGTGKTLAFL
IPAIQHLLDFPRRKPGPPRILILAPTRELAMQIADEAKEMAKYTNLSIATITGGVAYMNH
AEVFSKNQDIVIATTGRLLQYIKEENFDCRAVEMLILDEADRMLDMGFAKDVETIAAETR
WRKQTLLFSATMEGEGLYDFAKRILNEPVEINSDPSRRERKKIQQFYYRADDLEHKTALL
VHLLKQPDCKKAVVFVRKRERLHELVSWLHQAGILSSYLEGEMVQAKRSEAIKRLQNDKT
KVLVATDVAARGIDINDITHVINYDLPRTADIYLHRIGRTARAGKKGIAISLVEAHDNDL
LQKIERYIQEPIKLRVIEELKPKSKAPKAVTKKKPSKKAKEKKANKKEEQKKVKVRHRDS
KNVGKRRKPASTTETVNS
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgtctgaaatcactgacttttcatcacttgaactggatgaatcattacttaatgctctg
gaagataaagggtttaaaaaaccaaccgttatccaggcacaaactattcctgttgcgctt
gatgctaaagatattatgggctccgccccaacaggtaccggcaaaactctggcattttta
attccggcgattcagcatttacttgattttccgcgtcgtaaaccaggtcctccgcgtatt
ttgattcttgccccaacccgtgagctggcaatgcaaattgctgacgaagcgaaagaaatg
gccaagtacaccaacttaagtattgcaactattactggtggcgtggcttatatgaatcac
gcagaagtattcagtaaaaatcaggatatcgttattgctacaactggccgactcttacaa
tacataaaagaagagaactttgactgccgtgcagtagaaatgttgattttagacgaagct
gaccgtatgttggacatgggatttgccaaagacgtcgaaaccattgctgcagaaacccgt
tggcgtaaacaaactctgctcttttctgccaccatggaaggcgaaggcttgtatgatttt
gctaaacgtattttaaatgagccggttgaaatcaactcagatccttctcgtcgcgagcgt
aaaaagatccagcaattctattaccgtgctgatgaccttgaacacaaaactgccctgctc
gtccatttactaaaacaacctgattgtaaaaaagccgttgtctttgtacgcaaacgggag
cgtctacatgagctggtgagctggttacatcaggctggtatcttaagtagttatcttgaa
ggtgaaatggttcaggctaagcgcagtgaagcaattaaacgtctgcaaaatgataaaacc
aaagtgttggttgccaccgatgttgctgcgcgcggtattgatatcaatgatattactcac
gtaatcaactatgatttaccaagaacagctgatatttacctgcaccgtattggcagaaca
gccagagcgggcaaaaaagggattgcaatatctctggttgaagcccatgataatgactta
ctacaaaagatcgaacgctatattcaagaaccaattaagttaagagtgattgaagaatta
aagccaaaatctaaagcgccaaaagcggtcactaaaaagaaaccgtctaaaaaagcgaaa
gagaaaaaggccaataaaaaagaagaacagaagaaagtcaaagttcgtcatagagacagt
aaaaatgtaggaaaacgcagaaagccagctagcacaacggaaaccgttaatagttag

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