Zophobihabitans entericus: IPMB12_06735
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Entry
IPMB12_06735 CDS
T06493
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
orb
Zophobihabitans entericus
Pathway
orb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
orb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IPMB12_06735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
orb03000
]
IPMB12_06735
03400 DNA repair and recombination proteins [BR:
orb03400
]
IPMB12_06735
Enzymes [BR:
orb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
IPMB12_06735
Transcription factors [BR:
orb03000
]
Prokaryotic type
Helix-turn-helix
AraC family
IPMB12_06735
DNA repair and recombination proteins [BR:
orb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IPMB12_06735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_31
Motif
Other DBs
NCBI-ProteinID:
QIQ21410
UniProt:
A0A6G9ICV2
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All DBs
Position
1492688..1494151
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AA seq
487 aa
AA seq
DB search
MLALDNNGLYTAYKAKDARFDGRFFIGILSTGIYCRPVCKARQPKEENCSFYSTAAEAEQ
AGYRPCLLCRPELAPGSSITDATANLVHKAARMLEENCGSGQNLDELAGRLGCTDRHLRR
VFTAEYHVSPVQYLQTCRLLLAKNLLTDTNLSVLDVAMSAGFGSLRRFNDLFKEHYQLSP
TGLRKRMSEKKKESSNITLALGYRPPYLWEELLSFLATRAIPGVEVIKEGKYFRTVHLQD
THQKSLYGWVSVGHLPQQNALSVTVSEGLLPVIPQVLAKIRHMFDLYCDPTTIYDTLQVM
NDIRPGLCTPGTRLPGSFNAFEMVVRAVLGQQITIKAASTLAGRLVNTFGIQIETGIAGL
THVFPSPTDILKLSEPIESHLGPLGIIATRAKTIYALAKALEDKTIDFGLCADPETEMKK
LLDIPGIGSWTAQYIAMRTMEWTDAFLETDVGVKKALAPYSVKEISQIAEKWHPWRSYAT
INLWNSL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgttggacaataacggcttatataccgcatataaagcaaaagatgctcgcttt
gatggccgattttttattggcatattatctaccggaatatattgccgaccggtatgcaaa
gctagacagcctaaagaagaaaactgttctttttattctacagcggcagaagctgaacaa
gccggatatcgaccatgtctgctgtgcaggcctgaactggcaccgggttcatctattact
gatgctactgctaatttagttcataaagcagcaagaatgctggaagaaaactgcggtagt
ggtcaaaatctggatgagctcgccgggcgacttggttgtactgatcgccatttacgtcgg
gtatttactgcggaatatcacgtatcgccggtgcagtacctgcaaacttgccgcttactt
ttggctaaaaatctgctgactgatactaatctgtctgtgcttgatgtcgctatgagtgct
ggatttggtagtctgcgtcgcttcaatgatcttttcaaagaacattaccagttatcacca
accggacttagaaagagaatgtcagagaagaagaaggagagtagtaatattactttagct
ttaggatatcgaccgccttacctttgggaagagctcctcagtttcctggctactcgtgca
attcccggtgtggaggtgattaaagaaggaaagtattttagaactgtccacttacaagac
actcaccagaaatcactctatggttgggtgagtgtcgggcacttacctcagcaaaatgcc
ttaagtgtgactgtcagcgaaggattattaccggtgattccacaggtgctggcaaaaatt
cgacatatgtttgatctgtattgcgacccgacaacaatttatgacacgctacaggttatg
aatgatatccgtcccggactttgcactccaggcacccggcttcctggcagttttaatgct
tttgaaatggtagtcagggcagttctggggcaacagatcacaataaaagcggcaagtact
ctggctggcaggctggtgaacacttttggtatacagatagaaacaggtattgcaggatta
actcatgttttcccatcaccaacagatatccttaagctaagtgaaccgattgaaagtcac
cttggaccacttggtattatagccaccagagcaaaaaccatttacgccttagctaaagcg
ctggaagacaaaacgattgattttggtctgtgtgccgatccggagactgaaatgaaaaag
ttactggatattccgggaattggtagctggacagcacaatatatcgctatgcgtactatg
gagtggactgatgcttttcttgaaactgatgtgggggtaaaaaaagctctggctccttat
tcagtaaaagagatatcccaaattgcggagaagtggcacccatggcgcagttacgccacc
atcaatctttggaactcgttgtaa
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