Zophobihabitans entericus: IPMB12_07225
Help
Entry
IPMB12_07225 CDS
T06493
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
orb
Zophobihabitans entericus
Brite
KEGG Orthology (KO) [BR:
orb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
orb03016
]
IPMB12_07225 (trmA)
Enzymes [BR:
orb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
IPMB12_07225 (trmA)
Transfer RNA biogenesis [BR:
orb03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
IPMB12_07225 (trmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
Methyltransf_31
Methyltransf_15
MTS
Methyltransf_11
TRM5-TYW2_MTfase
PrmA
Methyltransf_12
KH_BICC1
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
QIQ21491
UniProt:
A0A6G9IB87
LinkDB
All DBs
Position
complement(1573258..1574361)
Genome browser
AA seq
367 aa
AA seq
DB search
MTNSLTDENYQQQFQHKIKTLTKLMAEFNPPAVQAFTSPIKHYRMRAEFRIWHDGDHICH
IMFDQLTRRRIEVTQFPIASQLINQAMIALLAAIKHNHPLRYKLFQVDYLSTLSQQLIIT
LLYHKQLDEAWELEARNLKDQLTAQGFNVQIIGRAKKHQINLDNDYIDEVLSVDGHNIIY
RQVENSFTQPNARVNIQMLEWAIEATKNATGDLLELYCGNGNFSLALAKNFRQVLATEIA
KPSVSAAQYNIQVNDIDNVKILRMSAEDFTEALKGEREFNRLKGIDLTSYECNTVLVDPP
RAGLDDKTLTMIQKYPTIIYISCNPLTLKDNLAVLTETHDIVKLAMFDQFPYTEHMESGV
VLAKKKN
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgacaaattcattaactgacgaaaattatcagcagcagtttcaacacaagattaaaacg
cttacaaagctaatggctgagtttaatccaccagcagtacaggcgtttacgtcaccaatt
aagcactacagaatgcgagctgaatttcgcatctggcatgatggcgatcatatttgtcat
attatgtttgatcagctaacacgcagacgtattgaagtgacgcagtttccgattgcttca
caactgattaatcaggcgatgatcgctttgcttgcagccattaaacataatcatccacta
cgctataaactgtttcaggtcgattatctttccaccttgagccagcaattaattatcact
ctgctctaccataaacagctggatgaagcctgggagctggaagcaagaaatttaaaagat
cagttgaccgcacaaggctttaatgtacaaattattggtcgggctaaaaaacatcaaatc
aatcttgataatgattacattgatgaagttctgtctgttgacggtcacaatattatttat
cgtcaggtagaaaatagctttactcagcctaatgcgcgcgtgaatattcagatgttggaa
tgggcaattgaggcaactaaaaatgcaacaggcgatctattggaactgtattgtggtaat
ggtaatttctctttagcactggctaaaaacttccgtcaggttctggcaacagagatcgca
aaaccgtctgtcagcgctgctcagtataatattcaggtcaatgatattgataatgttaag
atcctgcgtatgtcagcagaagattttactgaagcactaaaaggtgaacgggaatttaat
cgtttaaaaggaatagatttaacctcttatgagtgtaataccgtactggttgatccacca
cgtgcgggtcttgatgacaaaactctgactatgatccagaaatatccaacgatcatttat
atttcctgtaatccattaacactaaaagataatcttgctgtattaactgaaactcatgac
atcgtgaaactggcaatgtttgatcagtttccttatacagagcatatggaatcaggtgtt
gtgttagcaaaaaagaaaaattaa
DBGET
integrated database retrieval system
