Zophobihabitans entericus: IPMB12_11335
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Entry
IPMB12_11335 CDS
T06493
Name
(GenBank) tRNA/rRNA methyltransferase
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
orb
Zophobihabitans entericus
Brite
KEGG Orthology (KO) [BR:
orb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
orb03009
]
IPMB12_11335
03016 Transfer RNA biogenesis [BR:
orb03016
]
IPMB12_11335
Ribosome biogenesis [BR:
orb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IPMB12_11335
Transfer RNA biogenesis [BR:
orb03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
IPMB12_11335
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
QIQ22230
UniProt:
A0A6G9IF55
LinkDB
All DBs
Position
complement(2506094..2507419)
Genome browser
AA seq
441 aa
AA seq
DB search
MSDNEKTEKSKPTVFYTQKKSEDTSGKKHSDRRRKPSNSKSDKPYQEKLFKDRGSKDKSF
NDDSSKSRNYKDRPSKDRAYAARASDDKPYKDKPYGERSGKDRPYSDRSNKDRPYQDRQN
KEKNIGERSSRIETFQPSAPREERKYQKSEKYSNDKHSDEQSDSPWKSRVRKQPQLPTFE
TDDTESLEDEWRRQQKREETTVYSENSCKAIFKKRPDDILKVFLVQEMTTKFRDLVMWLA
EQRKGYDVISDDEMAKIAGTPHHGGVCFIVKKRQVVLATDYFKQVKSAKVDCVLAVDDIN
NPHNLGGLIRSATFFNVNGVILRQTQVFDSGSALRVAEGGAEYVTPIRADDLAVTLTQFK
QQGYQITALLPCKMKAIESEVLQTVKLAPKTVFVLFQQVNTILLKQVDNVVYLAGNQAMP
SLNISVATGILLAQWQQQAKS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataacgaaaaaactgaaaaaagtaaacccactgttttttatacccagaagaaa
agtgaagatacctctggtaaaaaacattcagatcgccgtcgtaagccatctaattctaaa
agtgataaaccttatcaggagaaactatttaaggacagaggctcaaaagacaaatcattt
aatgatgattcatctaaaagcagaaattataaagatcgcccatcaaaagacagggcttat
gctgctcgcgcttcagatgataaaccatataaagataaaccttatggtgaacgttctggt
aaagatagaccatatagtgatagatcaaataaagacagaccttatcaggatcgtcagaat
aaagaaaaaaatattggtgagcgtagcagccgtatcgaaacttttcagccttcagcaccg
cgagaagaacgtaagtatcagaaaagtgaaaagtatagtaatgataagcatagcgatgag
caaagtgactcaccatggaaaagccgtgtacgtaaacaaccacagctaccaacttttgag
actgatgatacagagtctttagaagatgagtggcgtcgtcagcaaaaaagagaagagacc
actgtttatagcgagaatagctgtaaagcaatttttaaaaaacgccctgatgatatttta
aaagtctttctggttcaggaaatgaccactaagtttagagatttagtgatgtggctggca
gagcaacgtaaaggctatgatgttatttctgatgatgaaatggctaagattgccggtact
cctcatcatggtggcgtttgctttattgtgaaaaagcgtcaggttgtgctagcgactgac
tattttaaacaagttaaatccgcaaaagtggattgtgtgctggctgttgatgatataaat
aatccacataatttaggtggcttgatccgttcagcaactttctttaatgtaaatggtgtg
attttacgccaaactcaggtgtttgattctggttcagctcttcgggttgctgagggtggt
gctgaatatgtaacaccaattagagctgatgatctggctgtaacccttacacagtttaaa
caacaaggatatcagattacggcactgttaccttgtaaaatgaaagcgattgagtcagaa
gtgttacaaacagtaaaacttgcacctaaaacggtatttgtgttattccaacaagtgaat
acgatactgctgaaacaagtggataatgtggtctatctggctggtaatcaggctatgccg
tcgttaaatatttctgtggctacaggtatattactggcacagtggcagcaacaagctaaa
tcttaa
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