Ornithobacterium rhinotracheale DSM 15997: Ornrh_0009
Help
Entry
Ornrh_0009 CDS
T02145
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
orh
Ornithobacterium rhinotracheale DSM 15997
Brite
KEGG Orthology (KO) [BR:
orh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
orh03009
]
Ornrh_0009
Enzymes [BR:
orh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Ornrh_0009
Ribosome biogenesis [BR:
orh03009
]
Prokaryotic type
ribosomal protein modification factors
Ornrh_0009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AFL96242
UniProt:
I3ZX08
LinkDB
All DBs
Position
complement(6439..7743)
Genome browser
AA seq
434 aa
AA seq
DB search
MRTKSTGRKKINIVTLGCSKNIYDSEVLMGQLKANGKEVVHEQAGDIVVINTCGFIENAK
EESINTILNFVDLKQRGLVEKVFVTGCLSERYKPDLEKEIPDVNQYFGTRDLPLLLKALG
ADYKHELVGERLTTTPRHYAYLKIAEGCDRPCAFCAIPLMRGAHKSTPIEDLVTEAKKLA
KNGTKELILIAQDLTYYGLDIYNKRALADLLKELVKVEGIEWIRLHYAFPTGFPEDVLDV
IKNEPKVCNYIDIPLQHISTPILKAMRRGTTEEKTNRLLDKFREKVPNMAIRTTLICGFP
GETEEDFELMKEWVKTQRFDRLGCFTYSHEENTHAFNMEDDVPQEVKEQRVAEIMEIQSQ
ISWELNQEKIGKIFKVLIDRKEGNYFVGRTEFDSPDVDNEVLIPAEETYLPIGEFVNAKI
TDATEFDLYAEVVD
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaaaatccacaggaagaaagaaaataaacatcgtaacgctcggatgctcaaag
aatatttatgattctgaggttttaatgggacaacttaaagccaacggaaaagaggtagtg
cacgagcaagcgggtgatattgtggtgattaacacttgtggttttatcgaaaatgcgaaa
gaagaatccatcaatactattttgaatttcgtggatttaaaacaacgcggattggtagaa
aaagtttttgtaacaggctgtctctctgaacgctataagcccgatctagaaaaagaaatc
ccagatgtaaaccaatattttggaacaagagatttacctttattattaaaggcattgggg
gcagactacaagcatgaactcgtgggcgaacgattaacgactacgccacgccattatgct
tatttaaaaattgcggagggttgcgacagaccttgtgctttttgtgccattccattaatg
cgtggagcacataaatctacgccaattgaagatttggtgaccgaagccaaaaaattggct
aaaaacggaaccaaagaattaattttaatcgctcaggacttaacttattatgggcttgac
atttataacaaaagagcccttgccgatttgctcaaagaattggtaaaagtagaaggaatt
gagtggattcgtttgcattatgcattcccgacgggctttccagaagatgtgctagatgtg
attaaaaatgaaccaaaggtttgtaactatatcgatattccattgcagcatatttctaca
cctattttaaaagcgatgcgccgtggtacaacggaagaaaaaaccaacagattgcttgat
aaattccgtgaaaaagtgccaaatatggcaattagaactaccttaatctgtgggttccct
ggcgaaacggaagaagattttgaattaatgaaagaatgggtaaaaacgcaacgatttgac
cgattgggctgtttcacctattcgcatgaagaaaacacgcacgctttcaacatggaagat
gatgtacctcaagaagtaaaagagcaacgcgttgcggaaatcatggaaattcaatctcaa
atttcatgggaactgaaccaagaaaaaattggaaagatttttaaagttttaatcgaccga
aaagaaggtaactattttgtgggacgcacagaatttgattcgcccgatgtggataatgaa
gttttaatcccagcggaggagacttatttgccaattggtgaatttgtaaatgctaaaatt
accgacgccactgagtttgatttatatgccgaggtggtagactaa
DBGET
integrated database retrieval system
