Ornithobacterium rhinotracheale DSM 15997: Ornrh_0448
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Entry
Ornrh_0448 CDS
T02145
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
orh
Ornithobacterium rhinotracheale DSM 15997
Pathway
orh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
orh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Ornrh_0448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
orh03021
]
Ornrh_0448
03400 DNA repair and recombination proteins [BR:
orh03400
]
Ornrh_0448
Enzymes [BR:
orh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Ornrh_0448
Transcription machinery [BR:
orh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Ornrh_0448
DNA repair and recombination proteins [BR:
orh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Ornrh_0448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AFL96655
UniProt:
I3ZY71
LinkDB
All DBs
Position
complement(467399..468391)
Genome browser
AA seq
330 aa
AA seq
DB search
MAILNFIKPDKVVLVQANDFKGQFEFRPLEPGYGLTIGNALRRVLINSLEGFAFTSVKIE
GVEHEFSTIEGVVEDVTEIILNLKKVRFKRQIEESESETVTAHISNKSQLTAGDLGKFIS
GFQVLNPELVLCNMEKSVELNITLTIEKGRGYVPAEENAQPNAPVGTIAIDSIYTPIKNV
KYAIENYRVEQKTDYEKLVLDIDTDGSIHPQLALTEAAKILIHHFMLFSDERITLEAEEV
ASNEAYDEEALHMRQLLKTNLVDLDLSVRALNCLKAAEVDTLGELVSYTKADLMKFRNFG
KKSLTELEDLVARKELTFGMDISKYKLDVE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggctatcttaaattttataaagcctgataaagtagttttagttcaagctaatgatttc
aaaggtcaattcgaatttagacccttggaaccggggtatggacttacgattggtaacgca
cttagaagagtgcttatcaattctttagaaggttttgcatttacatctgttaaaatagaa
ggtgtagaacacgaattttctacaatcgaaggtgtcgtagaagatgttactgagattatc
ttaaatcttaagaaagtaagattcaaaagacaaatagaggaatctgaaagcgaaactgta
actgcacatatttcaaataaaagtcaattaacagctggagatcttggtaaattcatttct
ggattccaagtgttaaatccagagttggtgctttgtaatatggaaaaatcagttgagtta
aacataactcttactatcgaaaaaggaagagggtatgtacctgcagaggaaaacgctcaa
ccaaatgctccagtagggacaatcgcgattgattctatctacaccccaatcaaaaatgtt
aaatacgcaattgaaaactatcgtgttgagcaaaaaactgattacgaaaaattagtttta
gatattgatactgatggttcaattcatccacaattagcactcactgaagctgctaaaatc
ttaattcaccactttatgttgttctcagatgagagaattactttagaggctgaagaagtt
gcttcaaacgaggcttacgatgaagaggcattgcatatgagacagttattgaaaactaat
ttagtggatctagacctatcagttagagcattaaattgtttgaaggctgcagaggttgat
acacttggagaattagtatcatatacaaaagcagatttaatgaaatttagaaatttcgga
aagaaatccctcacagagttggaggacttagtagccagaaaggaactaactttcggaatg
gatattagtaaatacaaattagacgtagaataa
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