KEGG   Ornithobacterium rhinotracheale DSM 15997: Ornrh_0448
Entry
Ornrh_0448        CDS       T02145                                 
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
orh  Ornithobacterium rhinotracheale DSM 15997
Pathway
orh03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:orh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Ornrh_0448
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:orh03021]
    Ornrh_0448
   03400 DNA repair and recombination proteins [BR:orh03400]
    Ornrh_0448
Enzymes [BR:orh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Ornrh_0448
Transcription machinery [BR:orh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Ornrh_0448
DNA repair and recombination proteins [BR:orh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Ornrh_0448
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-ProteinID: AFL96655
UniProt: I3ZY71
LinkDB
Position
complement(467399..468391)
AA seq 330 aa
MAILNFIKPDKVVLVQANDFKGQFEFRPLEPGYGLTIGNALRRVLINSLEGFAFTSVKIE
GVEHEFSTIEGVVEDVTEIILNLKKVRFKRQIEESESETVTAHISNKSQLTAGDLGKFIS
GFQVLNPELVLCNMEKSVELNITLTIEKGRGYVPAEENAQPNAPVGTIAIDSIYTPIKNV
KYAIENYRVEQKTDYEKLVLDIDTDGSIHPQLALTEAAKILIHHFMLFSDERITLEAEEV
ASNEAYDEEALHMRQLLKTNLVDLDLSVRALNCLKAAEVDTLGELVSYTKADLMKFRNFG
KKSLTELEDLVARKELTFGMDISKYKLDVE
NT seq 993 nt   +upstreamnt  +downstreamnt
atggctatcttaaattttataaagcctgataaagtagttttagttcaagctaatgatttc
aaaggtcaattcgaatttagacccttggaaccggggtatggacttacgattggtaacgca
cttagaagagtgcttatcaattctttagaaggttttgcatttacatctgttaaaatagaa
ggtgtagaacacgaattttctacaatcgaaggtgtcgtagaagatgttactgagattatc
ttaaatcttaagaaagtaagattcaaaagacaaatagaggaatctgaaagcgaaactgta
actgcacatatttcaaataaaagtcaattaacagctggagatcttggtaaattcatttct
ggattccaagtgttaaatccagagttggtgctttgtaatatggaaaaatcagttgagtta
aacataactcttactatcgaaaaaggaagagggtatgtacctgcagaggaaaacgctcaa
ccaaatgctccagtagggacaatcgcgattgattctatctacaccccaatcaaaaatgtt
aaatacgcaattgaaaactatcgtgttgagcaaaaaactgattacgaaaaattagtttta
gatattgatactgatggttcaattcatccacaattagcactcactgaagctgctaaaatc
ttaattcaccactttatgttgttctcagatgagagaattactttagaggctgaagaagtt
gcttcaaacgaggcttacgatgaagaggcattgcatatgagacagttattgaaaactaat
ttagtggatctagacctatcagttagagcattaaattgtttgaaggctgcagaggttgat
acacttggagaattagtatcatatacaaaagcagatttaatgaaatttagaaatttcgga
aagaaatccctcacagagttggaggacttagtagccagaaaggaactaactttcggaatg
gatattagtaaatacaaattagacgtagaataa

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