Ornithobacterium rhinotracheale DSM 15997: Ornrh_1672
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Entry
Ornrh_1672 CDS
T02145
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
orh
Ornithobacterium rhinotracheale DSM 15997
Pathway
orh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
orh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ornrh_1672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
orh03019
]
Ornrh_1672
Messenger RNA biogenesis [BR:
orh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Ornrh_1672
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
DUF4748
Motif
Other DBs
NCBI-ProteinID:
AFL97828
UniProt:
I4A1J4
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All DBs
Position
1678485..1680092
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AA seq
535 aa
AA seq
DB search
MEYIIIGIIGLLVGGLIAYILTKKQLDNRSEILYNEAKQKADLLEKEANRIKLEAESKLK
EANTEGESIKKEKILQAKEKFLELKAQHEEAVNQREKKISDREKVIKEKEHKLNEGLAEL
KKNRKSLTSEIEVFEERRIALHRKIDEVNANHKRQVELLEKISGYSADEAREELVQSLKD
EAKTKAQAHIQEIMDEANMNAREEARKIVIQSIQRIGTEQAVENAVSVFNLENDDIKGRI
IGREGRNIRAIEAATGVEIIVDDTPEAIVLSCFDPIRREIARLSMHKLVTDGRIHPGRIE
EVVAKTTKQIEEEIVNVGKKTVIDLGIHGLNPELIRIVGRMKYRSSYGQNLLQHSREVAH
IAGTLAAELGLNAKLAKRAGLLHDIGKVPEQESELPHAILGMQWAEKFGENPEVVNAIGA
HHDEIEMTSLLSPIVQVADAISGARPGARRQVVESYIQRLKDLENTALGFEGVQKAYAIQ
AGRELRVMVDCEKVDDARANELSFLISDKIQNEMTYPGQVKVTVIRETRAINIAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaatacataataataggaatcataggattgttggtaggaggattgattgcctacata
ctgacaaagaagcagttagataaccgaagcgaaattctctataacgaggcaaaacaaaaa
gcagatttattagaaaaagaagccaatcgcataaaactcgaagccgaaagcaagcttaaa
gaagccaataccgaaggcgagagtattaaaaaagagaaaatattacaagctaaagagaaa
tttttagaactaaaagcacaacacgaagaggcagtaaatcagcgagaaaagaaaatctct
gacagagaaaaagtaatcaaagaaaaagaacataaattaaacgaagggctagcagagctt
aagaaaaatagaaaatccctgacttctgaaatcgaagtttttgaagaaagaagaattgca
ttgcaccgcaaaatcgatgaggtaaatgccaatcataaacgccaagtagagctattagaa
aaaatctcgggttattccgcagatgaggcgcgcgaagaattagttcaatcattaaaagat
gaagctaaaaccaaagcgcaagcacacatccaagagattatggacgaggcaaatatgaac
gctcgggaagaagcgcgcaagattgtaattcagtcgattcagcgaatcgggacagagcaa
gcggtggaaaatgccgtatctgtatttaatcttgaaaacgatgatatcaaaggtagaatc
attgggcgcgagggaagaaacattcgtgccatcgaggcagccactggggtagaaatcatt
gtagatgatacgccagaggctattgtgctttcatgttttgaccctattcgtagagagatt
gctcgcttgtcgatgcacaaactcgtaaccgatggtagaattcacccaggtagaatcgag
gaagttgtggctaaaacgacaaagcaaatcgaggaggaaatcgtgaatgtaggaaagaaa
accgtaatagatttaggaattcatggtttaaatccagagttgattcgtatcgttgggcgt
atgaaataccgttcttcttacgggcaaaaccttttgcagcactctcgtgaggtggcgcac
attgcaggtactttagcggcagaattggggttgaatgccaaattggctaagcgtgcaggg
ttgttgcacgacatcgggaaagtgccagagcaagaatctgaattgccacacgctattttg
ggtatgcaatgggcagagaaatttggagaaaatccagaagtggtgaatgccattggagcg
caccacgacgagattgaaatgacttcgttattgtctcctattgtgcaagttgcagatgcg
attagtggagcaagaccaggcgcaagacgccaagtcgtggagtcatacattcagcgatta
aaagatttagaaaataccgctttaggatttgagggcgtgcaaaaagcttatgcaattcag
gcgggtagagagctccgtgtaatggtggattgcgaaaaagtggacgatgctagagccaac
gaattatctttcttgattagtgataaaattcaaaatgaaatgacttatccagggcaagtg
aaagttaccgtaattcgtgagacacgcgccatcaatattgcaaaataa
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