Ornithobacterium rhinotracheale DSM 15997: Ornrh_2332
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Entry
Ornrh_2332 CDS
T02145
Name
(GenBank) Excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
orh
Ornithobacterium rhinotracheale DSM 15997
Pathway
orh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
orh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ornrh_2332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
orh03400
]
Ornrh_2332
DNA repair and recombination proteins [BR:
orh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ornrh_2332
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Paralog
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG_UvrC
UvrC_M
UvrC_RNaseH
GIY-YIG
HHH_2
HHH_5
DUF7508
DUF349
UVR
Phage_gp38
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AFL98461
UniProt:
I4A3C7
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Position
complement(2357396..2359186)
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AA seq
596 aa
AA seq
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MKEKISIILQTLPHKPGVYQHLDKNGTVIYVGKAKDLKKRVSSYFQKEHDSARTRLLVRK
IEDIKTIVVETEFDALLLENNLIKKYQPKYNVMLKDDKSYPWICVKKERFPRIIYTRNMV
KDGSEYFGPYANPRIAKILLQLFKEIYNIRTCNYDLSEHKINEGKYKVCLEYHLGNCLGP
CEGLQTEEEYMKMIDNARNILKGNFKEAKAYLVEQMNEFAQKLEFEKAQNIKEKLEILEK
YQARSTVIHPSITNVDVYSITSDESYAYINFFNIVNGAIIRSHTTEIKKKLEETDEEILA
QAIIELRERFPSNAREIYLPFELDFEIPGVKITVPLIGDKRKIVELSEKNAKYYKIEKLK
QTKIVDPDRHTNRIMAQMKADLHLPVEPRHIEGFDNSNIQGTNPVSACVVFKNGKPSKKD
YRIFNVKTVEGPDDFASMEEVIYRHYKRMLEEGEPLPQLILIDGGKGQLGAALKSLDKLG
LRGKISIIGIAKRLEEIFFPGDSTPLYLDKTSETLKVLQHVRNESHRFGITRHRNRRSKN
AFNSELENIKGIGEQSIKDLLKHFKSVERIKHAEQKELEEVLGVHKAGLVFKYFHP
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagaaaaaattagcataattctacaaaccctcccgcacaaacctggtgtgtaccag
caccttgataagaacggaacggtgatttatgtaggaaaagccaaagatttaaaaaaaaga
gtttcgtcgtattttcagaaagaacacgactccgctcgcacacgccttttggtgcgcaaa
atcgaagacatcaaaaccattgtggtagaaacggaatttgatgcgcttttgcttgaaaat
aatttaattaaaaaataccagcccaagtacaatgtaatgctcaaagacgataaatcctac
ccttggatttgcgttaaaaaagagcgttttcctcgcattatttatacccgaaacatggtt
aaagacggctcggaatacttcggcccctatgccaatccccgcattgccaaaattctgctt
cagctatttaaagagatttacaacattcgcacttgtaattatgatttatctgaacataaa
ataaatgaaggcaaatataaagtgtgcttggaatatcatttaggaaattgcctaggccca
tgcgaaggcttgcagaccgaagaagagtacatgaaaatgattgacaatgcgagaaacatc
ttaaaaggaaattttaaagaagccaaagcttatctcgtggagcaaatgaatgaatttgct
caaaaattggaatttgaaaaagcacaaaacatcaaagaaaagctggagattttagaaaaa
tatcaggcgcgttctaccgtgattcacccatcaatcaccaatgtagatgtgtattccatc
acctcagacgaaagctatgcatacatcaatttctttaatattgtaaatggtgccatcatt
cgcagccacacgactgaaatcaaaaagaaattggaagaaactgatgaggaaattctggct
caagccatcattgagttgcgcgagcgttttccgtcgaatgcgagagaaatttaccttccg
tttgaattagattttgaaatccctggggtgaaaatcaccgtgccactcatcggggataag
cgaaaaatcgtagaactctcggaaaaaaatgcgaaatattataaaattgaaaaattaaaa
cagaccaaaatcgtagatcccgatcgccataccaatcgcatcatggcacaaatgaaagcg
gatttgcaccttcccgtggaacctcgccatatcgaaggttttgacaactcaaacattcaa
ggaacaaatcctgtttcggcttgcgtggtctttaaaaatgggaagcctagcaaaaaggat
tatcgcatatttaatgtaaaaacggtggaaggtcccgatgattttgcgagtatggaagaa
gtgatttatcgccactacaaacgaatgctcgaagagggcgaacctcttccgcaattaatc
ctaattgatggaggaaaaggtcagttaggagctgctttgaaaagtttggacaaattgggc
ttgcgcggaaaaatttcaatcataggaattgccaaaagattggaagaaatctttttccca
ggcgacagcacgccactttatctagacaaaacttctgagactttgaaagtcttgcaacat
gtgcgaaacgagtcgcaccgatttgggattacacgccaccgcaatcgccgcagcaaaaat
gcctttaattctgaattagaaaacatcaaggggattggtgagcagagcattaaagattta
ttaaagcattttaaatcggtagagagaattaaacatgccgagcaaaaggagctggaagag
gtgctaggggtgcacaaagcgggtttggttttcaaatactttcacccttaa
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