Ornithobacterium rhinotracheale ORT-UMN 88: Q785_03320
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Entry
Q785_03320 CDS
T03303
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ori
Ornithobacterium rhinotracheale ORT-UMN 88
Pathway
ori03030
DNA replication
ori03430
Mismatch repair
ori03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ori00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q785_03320
03430 Mismatch repair
Q785_03320
03440 Homologous recombination
Q785_03320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ori03032
]
Q785_03320
03400 DNA repair and recombination proteins [BR:
ori03400
]
Q785_03320
Enzymes [BR:
ori01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q785_03320
DNA replication proteins [BR:
ori03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q785_03320
DNA repair and recombination proteins [BR:
ori03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q785_03320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
HHH_3
DNApol_Exo
DUF1433
Motif
Other DBs
NCBI-ProteinID:
AIP98962
LinkDB
All DBs
Position
665399..669715
Genome browser
AA seq
1438 aa
AA seq
DB search
MKYLIFDTETTGLPSNYNAPVSDSDNWPRLVQLAWQVHDEKGDLIENHNLLVKPDGFDIP
FNATKIHGITNEKAQNEGIPLAEALSIFSESLKDKPLIIGHNINFDVNIVGAEYHRLQQD
TDQITKLPVLDTMVESVDFCAIGGGKGGRFKFPKLTELHEKLFGVPFDEAHNAAADVNAT
ARCFFELVRLRVIPDSKAKFSPDDFAAFLKKYNDTIQPYDIEVGTQIADKDAEAKKATAK
IKKKDSELEEVKDSPFFHFHNHSSHSILSATSTIGALVNRAIELGMPAVGLTDMGNMMGA
FHFVNAVKKTGTDLIPIIGCEVYISDRYKQTKFTKDNPDRRYTQVLIAKNKAGYHNLAKI
SSTGYIDGFYAGYPRVGKEVILKHKENIIATTGSLSSEIPHTILNVGETQAEETFKFWHE
AFGDDFYVELIRHGLEEEEHVNQVLIKFAKKYGVKILAQNNTFYINQEDSEAHDILLCVR
DGEKKDTPIGRGRDFRFGFPNNEFYFKTQAQMQEIFKDIPEAIDNFKEFLTKFEFYDLKH
DILLPKFDIPEQFRNEEDEKDGGKRGENAYLRHLTYEGAKQRYGEITPEITERLDFELAT
IENTGYPGYFLIVQDFTSQARKMGVSVGPGRGSAAGSAVAYCIGITNVDPIKYDLLFERF
LNPERVSLPDIDIDFDDRGREDIIRWVINKYGKDQVAQIITYGTMAGKSAIRDTGRVLNL
PLSDTDQIAKKVHTKLNKLFKMSDKDLEAKFNADELKDLKDIIELSKGDGLEATTIQQAR
VIEGSIRNTGVHACGVIITPSDIKELIPVATAKDSDMAVTQFDNSVVESAGLLKMDFLGL
KTLTIIKDAVRLVKETTGEDLVPDDFPLDDPKTYQEIFQKGKTTGIFQYESPGMQKHLKS
LKPDNFADLIAMNALYRPGPLAYIPNFIDRKHGKEEITYDLPEMEEYLAETYGITVYQEQ
VMLLSQKLANFTKGEADVLRKAMGKKLIDVLAKMKGKFIEQAKANNHPEKVLEKIWNDWE
AFAQYAFNKSHSTCYAYIAFHTAYLKAHYPAQYMAAVLSNNMKDIKDITFFMQECKRMGI
PVLSPDVNESILDFNVNQDGAIRFGLGAIKGVGAAAVEGIIKERQENGKFKNIYDFMERV
DLRQCNKKTMENLIFAGAFDELDEIHRAQYFAEDETGQTNLEKLVKYGQATQEGGSEFQF
DLFASAGMEIEVQKPEISNCDEWSDLYKLNKEKEVVGIYISSHPLDKYHIEIEKYAKIDL
ANMKKNESRLVGSTFTVAGMITSASHLESKTGQGFGKFVLEDYSDTFEFMLFNDDYLKLK
PYLDKNLFVLVQVAITQNKFSNKIYTNVKDISLLDGLIEKKSSSLKLSIELSNLNAEMLE
LIESSVQKHQGDKKLIMELIDTKNKVKFSSETTKYAINISKDLIQMLQDIDGLDLSLN
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatttaattttcgataccgaaaccactggcttaccaagtaattacaacgctccc
gtttccgattcagacaactggccccgattggttcaattggcatggcaggtgcatgatgaa
aagggagatttaatcgaaaatcataatcttttagtaaaaccagacggatttgacattccg
tttaatgcgactaaaattcacggaatcaccaacgaaaaagcgcaaaacgaaggaattccc
ttggcagaggcactctctattttctctgaatcactcaaagacaagcctttaatcattggg
cacaacatcaattttgatgttaatattgtgggggctgaatatcacagactccagcaagat
accgaccaaatcaccaagcttcctgtgctggataccatggtggaatcggtagatttctgt
gccataggcggtggaaaaggcggaagatttaaattcccaaaacttacggaattacacgaa
aaactctttggcgttccgtttgacgaggctcacaatgcggctgccgatgttaatgctacg
gctcgatgtttctttgagcttgtacgcttgcgagtaattcctgatagcaaggctaaattt
agcccagatgattttgctgcctttttaaagaaatacaacgatacgattcagccgtatgac
atcgaagtcggcacgcaaatcgcagataaagatgcggaggctaaaaaagctacggctaaa
atcaagaaaaaagattctgagcttgaagaagtaaaagattcgccatttttccattttcac
aatcatagttcgcactccattttatcggcaacctctacgattggagctttggtaaatcgc
gccattgagctaggcatgcctgcggtgggactcaccgatatgggaaacatgatgggggct
ttccactttgtgaatgccgtaaaaaaaacaggaacagacttaatcccaatcattggctgc
gaagtttatatttcagaccgatataagcaaactaaatttactaaagacaacccagaccgc
cgctacacacaagtgctaattgctaaaaacaaggcaggctatcacaacttggcaaaaatt
tcctctacgggatacatcgacggattctatgcgggctatccgcgtgttggcaaagaagtg
attttaaaacacaaagaaaacattatcgcaactacaggctcgctttcttctgagattccg
catacaatattaaatgtgggggaaacgcaagccgaagaaacttttaagttttggcacgaa
gcctttggcgatgatttttatgttgagctcattcgtcacgggcttgaagaagaagagcat
gtcaatcaagtgctcatcaaatttgcaaaaaaatacggagttaaaattttagcccaaaac
aatactttttatattaatcaagaagattccgaggcacacgacatcttgctttgtgtgcga
gatggcgagaaaaaagacacgccaattggtcgcggtcgagattttagatttgggtttccc
aacaatgaattctactttaaaactcaagcgcaaatgcaagagatttttaaagacattcca
gaagcaattgataatttcaaggaatttttaaccaaatttgaattctacgatttaaagcac
gacattctcttgcctaaatttgatattcctgaacagttcagaaatgaagaagacgaaaaa
gatggcggaaaaagaggggaaaatgcttatttaagacatttaacttacgaaggtgccaaa
caacgctatggcgaaataacgcccgaaatcactgagcgtctagattttgagcttgcgacc
atcgaaaacacaggatatcctggttatttcttgattgtgcaagatttcacctcccaagcg
agaaaaatgggcgtttcggtaggtcctggtcgtggttcagcagcgggttctgccgtagcg
tattgtattggaatcaccaatgtagatcccattaaatatgatttgctatttgagcgtttc
ttgaatcctgagcgtgtatccttacccgatatcgatattgattttgatgaccgcgggcga
gaggacatcatccgctgggtgattaataaatatggtaaagaccaagtggcgcaaatcata
acttacggaaccatggcggggaaatcggcgatacgcgacacggggcgtgtgctgaacctc
ccgctttcggacaccgaccaaatcgcaaagaaagttcacaccaagttgaacaaattgttc
aaaatgagcgacaaggatttggaagctaaattcaatgccgatgaattaaaagatttaaaa
gacatcatagaactatccaaaggtgatgggctcgaggcaactaccattcaacaagcgagg
gtaatcgaaggaagtatccgaaacacgggcgtgcacgcttgtggggtaatcatcacacct
tcagacattaaggaattaattccagtggcgaccgccaaggattctgacatggcagttact
cagttcgacaactctgtggtggaatcggctgggttgctaaaaatggactttttgggctta
aaaacactaacaatcattaaagatgcagtgcgtttagtcaaagaaactacgggcgaagat
ttggtgcccgatgactttccgcttgatgacccaaaaacttatcaagagattttccaaaaa
ggtaaaacaacagggattttccaatacgaatcccctggaatgcaaaaacacttaaaatcg
ctaaaacccgataactttgcggatttaattgcgatgaacgccttgtatcgtccaggacct
ctagcatatattccaaactttatcgatcgtaaacatggaaaagaggaaatcacctatgat
ttgcccgaaatggaagaatatttggctgaaacctacggaattaccgtttaccaagagcag
gtgatgctactctcgcaaaaattggcaaacttcacaaaaggggaagccgatgtcttgcgt
aaagccatgggtaaaaaattgattgatgttctggctaaaatgaaaggcaaattcattgaa
caagccaaagcaaacaatcaccctgaaaaggttttagaaaaaatttggaacgactgggaa
gcctttgctcaatatgcgtttaacaaatcgcactccacttgctacgcctatattgcattc
catacggcttatttaaaagcacactaccctgcacaatatatggctgccgtgttgagcaac
aacatgaaggacatcaaggatattaccttctttatgcaagaatgcaaaagaatgggaatc
cctgtattaagtcctgatgtgaatgaatctattttagacttcaatgtgaaccaagatgga
gctattcgttttgggcttggtgccatcaaaggtgtaggagctgccgctgtggaaggcatc
atcaaagaaagacaagaaaacgggaaattcaaaaacatttatgatttcatggagcgtgtc
gatttaagacaatgtaacaaaaaaaccatggaaaatttgatttttgcaggagcttttgac
gaattagacgaaatccaccgtgcgcaatatttcgccgaagacgaaactggacaaaccaat
ctagaaaaattggtaaaatatggacaagctacccaagaaggcggaagcgaattccagttt
gatttatttgcctctgctggaatggaaatagaagttcaaaaaccagagatcagcaattgt
gatgagtggagcgatttatataaattaaataaagaaaaagaagttgtaggaatttatatc
tcctctcacccactcgataaataccatatcgaaatagagaaatatgctaaaatagaccta
gccaatatgaaaaagaatgaatcgagattagtgggttccaccttcaccgtagcgggaatg
atcactagtgcgagccatcttgaatccaaaacaggacaaggctttggaaaattcgtacta
gaggattattcagatacctttgaatttatgctattcaacgacgactatttaaaattgaaa
ccctatttagacaaaaatcttttcgtcttggttcaagtagcaattactcaaaacaagttt
tctaataaaatatatacaaatgtgaaagacatctcacttctcgatggcttgattgaaaag
aagagtagctcacttaaactttcaatcgaattatctaatctaaacgcggaaatgctagag
ctcatcgaatcttctgtacaaaaacaccaaggggataaaaaacttattatggaactcatt
gataccaagaataaggttaaatttagctccgagaccacaaaatatgcgattaatattagt
aaagatttgatacaaatgttgcaagacatcgatgggcttgatttatctttaaactaa
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