Ornithobacterium rhinotracheale ORT-UMN 88: Q785_04315
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Entry
Q785_04315 CDS
T03303
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ori
Ornithobacterium rhinotracheale ORT-UMN 88
Brite
KEGG Orthology (KO) [BR:
ori00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ori03400
]
Q785_04315
DNA repair and recombination proteins [BR:
ori03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Q785_04315
Archaeal homologous recombinant proteins
Q785_04315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
SMC_N
Motif
Other DBs
NCBI-ProteinID:
AIQ00407
LinkDB
All DBs
Position
864993..868019
Genome browser
AA seq
1008 aa
AA seq
DB search
MKILKIEFKNINSLEGEHCIDFTQKPFEDNSLFAITGPTGSGKSTILDVISLALYNKIPR
LDSISKSNIEKTGSILTKGKKEAMAAVTYACTRGTIKSVWSIRVNRNGNLAEYEMFVYDE
KGTPLNQKKSEAPALNEQFIGLSYEQFIKSALLAQGEFAKFLKEDKKSRFQLLEKITGAN
IYRLIGQKAYEKNKNSGEQIKLWERDKAGYEEKILPQELEEKYLAEAKENTQTLDSENKK
RELLNAQIKLKKDLAQKQIEWENARKNILAIENQIEQFKNNEGKLLSRHEATESIATELT
SWQTLQTSLAKIEQKSEILVAEEKKLLAQKAEKFTQAKNMLNSDFLEENLNESLAKLKKT
IKNLNEKRLQKANEYGSLKNEFNLVAKPLGVVLAKKTNEVQEQLSVLKAKAEHTEHAIKE
ISANIHLDKNLSVQEQLQQARKNLETYNEIELSMQSLKNIDETLSEKNKKLNEISAELSA
LPSKIKLAKEDKDLKKEKHALIEEKIAFANEKKSLEEHRAHLAQGKPCPLCGATEHPFAH
ETTSEDDHLKIEEKQAKEALRISTENLLKLENQQASLSKEKLNLEGEIQQKNEELNRKKS
AMQEKFPEVDFSTHWAEKIATTKAEIKQLESLENHQTLHEAATAAIPLVESIIKVTTEGK
SLKNQIEDFEAQGATEESIDRFLLDWERTLSTIKHKSQEIKSLEKEKKEENDKFSSLEKD
LNQKIIPLDFVDIASALKAKLPHSQAQLFKEKINRLNPDLQKLTGQEDILKKDYESLAQN
SPTESLEELEKALSHNEQLLNQLKNKEKELNHLLTNNDSYKLELKKLNEKIEQENKENRI
WRDLDKMIGDAKGEKFNMFAQGLTLKQLIYLANRRLTNLSPRYLIANPEKEEDDSLFVID
KDMGNQRRSVKTLSGGETFILSLALALALSDLASKNVQIDSLFIDEGFGTLDPETLDLTL
DTLERLQQESKKMIGIISHVSSLKERIATQIVLKQNGSGISTLEIKSN
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctaaaaatcgaatttaaaaacatcaactcgctggaaggggagcactgcata
gatttcacgcagaaaccttttgaagacaacagtctttttgccattacaggccctacggga
agcggaaaatccacgattctagatgtgatttcgcttgcgttgtacaacaaaattcctcgc
ctagactccatcagcaaaagtaatatcgaaaaaacgggttctatccttacgaaaggaaaa
aaagaagccatggcagcggtgacctacgcttgcacccgaggcactataaaatccgtgtgg
agcattcgtgtgaatagaaacgggaatttggctgaatatgaaatgtttgtgtacgatgaa
aagggcacaccactgaatcaaaaaaagagcgaagcacctgcactcaacgagcaatttatt
gggctaagttatgagcaattcatcaaatcggcattgctggctcagggcgaatttgctaaa
tttttaaaagaggataaaaaatcaagatttcagcttttagagaaaatcacgggggcaaat
atttatcgtttaatcgggcaaaaagcttatgagaaaaataaaaattcaggcgagcaaatt
aaactttgggaaagagacaaagcgggctacgaggaaaaaatattgccccaagaattagaa
gaaaagtaccttgccgaggcaaaagaaaatacgcaaacactagactctgaaaacaaaaaa
agagagctgctcaatgcgcaaattaaactaaaaaaggatttggctcaaaagcaaattgaa
tgggaaaatgcccgaaaaaatattctagcaattgaaaatcaaattgagcaatttaaaaat
aatgaaggcaaactcctaagcagacacgaagcaacggaaagcatcgcaacggaactgaca
agctggcaaacactgcaaacgagtttggctaaaattgagcagaaatctgaaattttagtc
gcagaagaaaaaaaacttttagcccaaaaagctgaaaaatttacgcaggctaaaaatatg
ctaaattcagattttttggaggaaaacctcaacgaatctttggctaaacttaaaaagaca
atcaaaaatttaaacgaaaaaagattacaaaaagccaacgaatacggttcgctaaagaat
gagtttaacctcgtggctaaaccactcggggtcgtgctggcaaaaaaaaccaatgaagta
caagagcaactttcggtcttaaaagccaaagctgaacacacggaacatgcgataaaagaa
atttcggcaaatattcatttggataaaaatttaagcgtccaagaacaattgcaacaagca
cgaaaaaaccttgaaacctacaacgagattgagctttcgatgcaatcgctcaagaatatc
gacgaaactttaagcgaaaaaaataaaaaactcaatgaaatttcggctgaattatctgca
ttgccaagtaaaatcaaattagccaaagaagacaaagaccttaaaaaagaaaaacacgct
ctgattgaagaaaaaattgctttcgccaatgagaaaaaaagcttggaggaacatcgcgca
catttggcacagggcaaaccttgtccgttatgtggagccaccgagcacccttttgcccac
gaaacaacatcggaagacgaccatttaaaaatagaagaaaaacaagccaaagaagcttta
cgaatttcgaccgaaaatctcttaaaacttgaaaatcaacaagcgtctttaagcaaagaa
aaattaaacttagagggagaaattcagcaaaaaaatgaagaattgaatcgcaaaaaaagt
gcgatgcaagaaaaatttcctgaagtggatttttcgacccattgggcggaaaaaatcgca
actaccaaagcggaaatcaagcaattggaatcgctggaaaatcaccaaacgctacacgaa
gcggctacggctgcaatccctctggtggaaagcattatcaaagtaaccacagagggcaaa
tcgcttaaaaatcaaatcgaggattttgaggcacaaggtgctaccgaagagagtatagat
cgcttcctgcttgattgggaacgcactttaagtacaattaaacataaatcacaggaaatc
aaatctttagaaaaagaaaaaaaggaagaaaatgataaattctcatcgctagaaaaagat
ttaaaccaaaaaattattccgcttgattttgtggacattgcaagtgcactcaaggctaaa
ttaccacacagccaagcacaattgtttaaagaaaaaattaatcgattaaaccctgattta
caaaaacttacagggcaagaagatatcttaaaaaaggattacgagagtttagcccaaaat
agcccaactgaatccttggaagaattagaaaaagccctctcccacaacgagcaactgctc
aatcaactgaaaaacaaagagaaagaattgaatcatcttttaacaaataatgattcttat
aaacttgagctgaaaaagcttaacgaaaaaatagaacaagaaaacaaagaaaaccgaatt
tggcgtgatttggacaaaatgattggagatgccaagggtgagaaatttaacatgtttgca
caaggtttaacgctcaagcaattgatttatttagccaatcgccgcttgaccaacctcagc
ccaagatacctgattgctaatcctgaaaaagaggaagatgatagcctttttgtcatcgat
aaggatatgggcaatcagcgtcgttcggtaaagacactttcgggtggagaaacatttatt
ttaagtttggcgttggcattggcactttcggatttggcgtccaaaaatgtgcaaatcgat
agcctttttattgacgaaggtttcggaacgctggatccagaaacgctggatttaacgcta
gatacgcttgaacgccttcaacaagaaagcaagaaaatgataggcatcatcagccatgtt
tcttcgctcaaagaacgcatcgctacacaaatcgtgttgaaacaaaatggctctggaata
agtacgcttgaaatcaaaagcaattag
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