Ornithobacterium rhinotracheale ORT-UMN 88: Q785_05725
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Entry
Q785_05725 CDS
T03303
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ori
Ornithobacterium rhinotracheale ORT-UMN 88
Brite
KEGG Orthology (KO) [BR:
ori00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ori03009
]
Q785_05725
Enzymes [BR:
ori01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Q785_05725
Ribosome biogenesis [BR:
ori03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Q785_05725
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
DUF6831
HSD_C
Motif
Other DBs
NCBI-ProteinID:
AIP99296
LinkDB
All DBs
Position
complement(1169664..1170680)
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AA seq
338 aa
AA seq
DB search
MDKNKSLRFAKIYLIMNTNRRGGNRRGGTPRNAQSDNRKRASRPFKKTDRRTENSEDKKP
FRKEGDARGDFKRKPSFGSNRKFGNKPFRKRFSSKKTEEEPKDTRLRLNKFIAKSGLCSR
READEHIKNGMVEVNGKMVTEMGYKVEPTDEVRFDGKILTPEDKIYILLNKPKGFITTTN
DERDRKTVMDLVKNATPTRVFPVGRLDRQTTGVLLFTNDGDLTKKLTHPSHNVRKIYHVV
LDRPLHGDDMERVRKGIPMTEGIARVDKVSYIDGKPHNEVGVEIHIGWNRVVRRIFERMG
YKIVSLDRVSFAGLTKKNVKRGTWRILDKQEVDFLKMV
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtggataaaaataaatcccttagatttgcaaaaatttatttaatcatgaatacaaacaga
agaggtggaaaccgcagaggtggcacgcccagaaatgctcaatccgataacagaaaaaga
gcgtcgagaccttttaaaaagactgatagaagaaccgaaaattctgaagacaaaaaacca
ttcagaaaagaaggagatgcaagaggcgattttaaaagaaaaccaagctttggtagtaac
agaaaatttggcaataagccttttagaaaaagattttcgtctaaaaaaaccgaagaagag
ccaaaagacactcgcctacgattgaacaaatttattgctaaatcaggactttgcagtcgt
cgtgaggcagatgagcatatcaaaaacggaatggtggaagtgaacggcaaaatggtaacc
gaaatgggctacaaagtagaaccaaccgatgaggtgcgttttgacggaaaaatcctaacg
ccagaagataaaatctatattttacttaataaaccaaaaggatttatcactactaccaac
gatgaacgcgaccgcaaaaccgtgatggatttggtgaaaaacgcaacgcctacacgcgtg
tttcctgtggggcgtcttgaccgacaaaccactggggttttgctatttaccaacgatggt
gatttaaccaaaaaattaacgcacccaagccacaatgtgcgcaaaatctatcatgtcgtg
ctagatcgcccattgcatggagacgacatggagcgtgtgcgcaaaggtatcccaatgaca
gaaggaattgctcgtgtagacaaagtttcatatatcgatggcaaaccacacaacgaagtg
ggtgtagaaatccacattgggtggaaccgcgtagttcgtcgtatttttgaaagaatgggc
tacaaaatcgtttcgctagatcgcgtttcgtttgcggggctcaccaagaaaaatgtaaaa
cgaggcacttggagaatccttgataagcaagaggttgacttcttaaaaatggtataa
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