Ornithobacterium rhinotracheale ORT-UMN 88: Q785_05775
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Entry
Q785_05775 CDS
T03303
Name
(GenBank) helicase
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
ori
Ornithobacterium rhinotracheale ORT-UMN 88
Brite
KEGG Orthology (KO) [BR:
ori00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ori03032
]
Q785_05775
03029 Mitochondrial biogenesis [BR:
ori03029
]
Q785_05775
Enzymes [BR:
ori01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Q785_05775
DNA replication proteins [BR:
ori03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
Q785_05775
Mitochondrial biogenesis [BR:
ori03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
Q785_05775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
HTH_40
AAA_30
AAA_19
AAA_22
Pif1_2B_dom
AAA_5
DEAD
SH3_13
Herpes_Helicase
NTPase_1
AAA_7
PhoH
AAA
AAA_24
T2SSE
AAA_16
nSTAND3
HTH_20
UvrD-helicase
PF0610-like_N
AAA_14
ResIII
UvrD_C_2
SRP54
CENP-B_N
HTH_11
IstB_IS21
HTH_7
HTH_5
Sigma70_r4_2
NAT10_TcmA_helicase
SLFN-g3_helicase
ATPase_2
GerE
TrwB_AAD_bind
HerA_C
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AIP99301
LinkDB
All DBs
Position
complement(1176813..1178486)
Genome browser
AA seq
557 aa
AA seq
DB search
MTQEKALDILKSGRNVFLTGSAGTGKTYTLNKYIEYLKSHKIPVAITASTGIAATHLNGM
TVHSWSGIGIKSHIETAHLQKLKERKYMRDKMKDVRVLIIDEISMLHKNRLNAVNDVLQY
FKDNPLPFGGVQVVFSGDFFQLPPIGENREKARDKFCFMSEAWVNAKPYICYLTEQYRQS
NNPLNQLLNEMRAGEVSPISYDVVNQKIQETMYSDVDRFPHLYTHNVDVDKINEQKLKLL
EAIPQKFKATAKGSPSLIEVMKTNILAPYEFELKEGAEVMFVKNNFEKGFSNGTLGIVKE
FSEDGYPIVETKDGNLIVAEPEEWKVEDENGKTLASITQIPLRLAWAITVHKSQGMTLDE
ACIDLRKTFEKGQGYVALSRLRDLEGLTLLGVNEVAMQLDELAFKADKRFLELSDWADDT
FSTEDLKREHIPFIVKCGGQIEPVKVLSQTETKEKGKKSTLIITKEMLEEGMSPEEIAKK
RDLTESTIYGHLNKLKTQFPELNFSSYIACDPHIVDRVRNLVDNLNFEDGEIRLKPIYDT
LKEEIPYSEIRKALLLV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
ttgacgcaagaaaaagcattagacatattaaaatctgggcgaaatgttttccttacaggt
tctgctggtacgggaaagacttataccctcaacaaatacatcgaatatttaaaatctcat
aaaatccctgtcgccatcacggcaagcacgggaattgccgccacacacctcaatggaatg
acggtgcattcttggagcggaatcggcattaaaagccacatagaaaccgctcacctgcaa
aagttgaaggaacgaaagtacatgagggacaagatgaaagatgtacgcgtcttgatcata
gatgagatttccatgttgcacaaaaatagactgaacgccgtaaacgatgttttgcagtat
ttcaaagacaatcccctgccatttggaggcgttcaagttgttttttctggcgatttcttt
cagctccctcccattggcgaaaacagggaaaaagctagagataaattctgtttcatgtcc
gaagcttgggtgaatgccaagccctacatttgctacttaacagagcaatatcgacaaagc
aataatccgctcaatcaattgctcaacgaaatgcgagctggcgaggtgagccctatttcc
tacgatgtcgtcaatcaaaaaattcaggaaaccatgtactccgatgtagatcggtttcct
cacctctacacacacaatgtagatgttgataaaatcaacgaacaaaaactaaaattacta
gaagctattccgcaaaagtttaaagccacagccaaaggaagcccttctcttatcgaagta
atgaaaacaaacattcttgccccttatgaatttgagctaaaggaaggagccgaggtcatg
tttgtgaaaaacaattttgaaaaaggattctccaacggaaccttaggcatagtgaaagaa
ttttccgaagacggataccccattgtagaaaccaaagatggaaacttgattgtagcagaa
ccagaagaatggaaagtggaggacgaaaatggtaaaactttagcctccatcacccaaatt
cctctgcgtttagcatgggcaatcactgtgcacaaaagtcaaggtatgacattggacgaa
gcctgcatagatttgcgcaaaacttttgaaaaagggcaaggctatgtcgcactatctcga
ttgagagacctagaagggctcacgctgctaggcgtgaacgaagtagctatgcagctcgac
gaattggcattcaaagcagataaacgctttctagaactctcggactgggcagacgacacc
ttctctaccgaagatttaaaacgagagcacattccttttattgtaaaatgtggcggacaa
attgaacctgtaaaagtgttaagccaaactgaaaccaaagaaaaaggcaaaaaaagcact
ctcataattaccaaagaaatgctcgaagaaggcatgtctcccgaagaaatagcaaaaaaa
agagaccttacagaatctactatttacgggcatttgaataaattaaaaacacaatttcca
gaattaaatttctcctcctacattgcatgcgatccgcacattgtagatcgtgtgcgcaac
ctcgttgataatttaaattttgaagatggcgaaataagattaaaacctatttacgacaca
ctgaaagaagaaatcccctattccgaaatacgaaaagctttacttttagtctaa
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