Ornithobacterium rhinotracheale ORT-UMN 88: Q785_05895
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Entry
Q785_05895 CDS
T03303
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ori
Ornithobacterium rhinotracheale ORT-UMN 88
Pathway
ori03030
DNA replication
ori03430
Mismatch repair
ori03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ori00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Q785_05895
03430 Mismatch repair
Q785_05895
03440 Homologous recombination
Q785_05895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ori03032
]
Q785_05895
03400 DNA repair and recombination proteins [BR:
ori03400
]
Q785_05895
Enzymes [BR:
ori01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Q785_05895
DNA replication proteins [BR:
ori03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Q785_05895
DNA repair and recombination proteins [BR:
ori03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Q785_05895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AIP99322
LinkDB
All DBs
Position
complement(1193992..1195305)
Genome browser
AA seq
437 aa
AA seq
DB search
MKYAVLDIEATNGKRGEEKIIDIAIYQITDEEISDQFGSMVNPQREIEPYVQELTGITNK
MVRRAPKFHEIAKRIVEITEGCIIVGHGVHFDYRMLQQEFKSLGYDFKRNTLDTLELSKQ
LIPDEESYSLGKLCKSLGIPLTNRHRAQGDTVATVKLFQLLKEKDTEKKIIESQTQSGSE
KAPTQLTKKLLALQKNLPTYTGVYYYHNQKGEIFYIKAAKNIAAEVNRDFASSLKEKQKI
QRKVARISHEATGSFLIALLKINEEKKTHKKILNRKSNYFSYGLFIQKEKSSGMQSLEIS
TILKTRRSPLLLFSTRKKAFNALNDLSQKFKLTAEDSAKERSKKIKDLKQFLDFPQRDFL
IIDKGRNPQENTFVSIINNQLHHYGFFSLHNQLEDGKIREKLGISLHSNAINKALIKTFL
YQSKSLKIKPLNNEKPK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatatgctgttttagacatagaagctaccaacggaaagcggggcgaggaaaaaatc
atagacattgcgatttaccaaatcaccgacgaggaaatcagcgatcagtttggctctatg
gtaaatccacagcgcgaaatcgagccttatgtgcaagaactcacgggaattaccaataaa
atggtgcgtcgcgcacctaaatttcacgaaatcgccaaacgcattgtagaaatcaccgag
ggctgcatcatcgtagggcatggtgtgcattttgattatcgcatgcttcaacaggaattt
aaatccttaggctatgattttaaacgcaatacgctcgacacgctagaactgagcaagcaa
ctcattcccgacgaggagtcgtattctttgggtaaattatgcaaatcgctcggcattccg
ctcaccaatcgccaccgagcgcagggcgacaccgtggctacggtaaaactttttcaatta
ttgaaagaaaaagacaccgagaaaaaaatcatcgaaagccaaactcaatcgggcagcgaa
aaagcccctacccaattgactaaaaagcttttggctttgcaaaaaaatcttcctacctat
acgggcgtttactactaccacaaccagaaaggcgagattttctacatcaaagcggcaaaa
aacattgccgcagaagtgaaccgagattttgcctcatcgctgaaagaaaaacaaaaaatc
cagcgcaaggtagcaaggatttcgcacgaggcaacgggcagttttttaatcgcattatta
aaaatcaacgaggagaaaaaaacacacaagaaaatcctaaaccgaaaaagcaattatttc
tcatacggattatttattcaaaaagaaaaatcaagtggcatgcaatcgctggaaatcagc
acaatattaaaaacgcgacgcagtccgctattgctattttcaacacgcaaaaaagctttt
aatgccttaaatgatttaagccaaaaatttaaactcacagcagaagattccgccaaggaa
cgaagtaaaaaaattaaggatttaaaacaatttttggactttccgcaaagggatttttta
atcatagataaaggcagaaatccgcaagaaaatacatttgtaagtattatcaacaatcag
ctacaccactacggattctttagccttcacaatcaattagaagacggaaaaattcgtgag
aaattaggaatttccttgcactccaatgctataaacaaagctttgattaaaactttttta
taccaaagcaaaagtttgaaaattaaaccacttaacaacgaaaaaccgaaataa
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