Ornithobacterium rhinotracheale ORT-UMN 88: Q785_07490
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Entry
Q785_07490 CDS
T03303
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ori
Ornithobacterium rhinotracheale ORT-UMN 88
Pathway
ori03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ori00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Q785_07490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ori03021
]
Q785_07490
03400 DNA repair and recombination proteins [BR:
ori03400
]
Q785_07490
Enzymes [BR:
ori01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Q785_07490
Transcription machinery [BR:
ori03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Q785_07490
DNA repair and recombination proteins [BR:
ori03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Q785_07490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AIP99548
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All DBs
Position
1506708..1507700
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AA seq
330 aa
AA seq
DB search
MAILNFIKPDKVVLVQANDFKGQFEFRPLEPGYGLTIGNALRRVLINSLEGFAFTSVKIE
GVEHEFSTIEGVVEDVTEIILNLKKVRFKRQIEESESETVTAHISNKSQLTAGDLGKFIS
GFQVLNPELVLCNMEKSVELNITLTIEKGRGYVPAEENAQPNAPVGTIAIDSIYTPIKNV
KYAIENYRVEQKTDYEKLVLDIDTDGSIHPQLALTEAAKILIHHFMLFSDERITLEAEEV
ASNEAYDEEALHMRQLLKTNLVDLDLSVRALNCLKAAEVDTLGELVSYTKADLMKFRNFG
KKSLTELEDLVARKELTFGMDISKYKLDVE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggctatcttaaattttataaagcctgataaagtagttttagttcaagctaatgatttc
aaaggtcaattcgaatttagacccttggaaccggggtatggacttacgattggtaacgca
cttagaagagtgcttatcaattctttagaaggttttgcatttacatctgttaaaatagaa
ggtgtagaacacgaattttctacaatcgaaggtgtcgtagaagatgttactgagattatc
ttaaatcttaagaaagtaagattcaaaagacaaatagaggaatctgaaagcgaaactgta
actgcacatatttcaaataaaagtcaattaacagctggagatcttggtaaattcatttct
ggattccaagtgttaaatccagagttggtgctttgtaatatggaaaaatcagttgagtta
aacataactcttactatcgaaaaaggaagagggtatgtacctgcagaggaaaacgctcaa
ccaaatgctccagtagggacaatcgcgattgattctatctacaccccaatcaaaaatgtt
aaatacgcaattgaaaactatcgtgttgagcaaaaaactgattacgaaaaattagtttta
gatattgatactgatggttcaattcatccacaattagcactcactgaagctgctaaaatc
ttaattcaccactttatgttgttctcagatgagagaattactttagaggctgaagaagtt
gcttcaaacgaggcttacgatgaagaggcattgcatatgagacagttattgaaaactaat
ttagtggatctagacctatcagttagagcattaaattgtttgaaggctgcagaggttgat
acacttggagaattagtatcatatacaaaagcagatttaatgaaatttagaaatttcgga
aagaaatccctcacagagttggaggacttagtagccagaaaggaactaactttcggaatg
gatattagtaaatacaaattagacgtagaataa
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