Ornithobacterium rhinotracheale ORT-UMN 88: Q785_08205
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Entry
Q785_08205 CDS
T03303
Name
(GenBank) ribonuclease
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ori
Ornithobacterium rhinotracheale ORT-UMN 88
Pathway
ori03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ori00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q785_08205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ori03019
]
Q785_08205
Messenger RNA biogenesis [BR:
ori03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Q785_08205
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
DUF4748
Motif
Other DBs
NCBI-ProteinID:
AIP99654
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Position
1630221..1631828
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AA seq
535 aa
AA seq
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MEYIIIGIIGLLVGGLIAYILTKKQLDNRSEILYNEAKQKADLLEKEANRIKLEAESKLK
EANTEGESIKKEKILQAKEKFLELKAQHEEAVNQREKKISDREKVIKEKEHKLNEGLAEL
KKNRKSLTSEIEVFEERRIALHRKIDEVNANHKRQVELLEKISGYSADEAREELVQSLKD
EAKTKAQAHIQEIMDEANMNAREEARKIVIQSIQRIGTEQAVENAVSVFNLENDDIKGRI
IGREGRNIRAIEAATGVEIIVDDTPEAIVLSCFDPIRREIARLSMHKLVTDGRIHPGRIE
EVVAKTTKQIEEEIVNVGKKTVIDLGIHGLNPELIRIVGRMKYRSSYGQNLLQHSREVAH
IAGTLAAELGLNAKLAKRAGLLHDIGKVPEQESELPHAILGMQWAEKFGENPEVVNAIGA
HHDEIEMTSLLSPIVQVADAISGARPGARRQVVESYIQRLKDLENTALGFEGVQKAYAIQ
AGRELRVMVDCEKVDDARANELSFLISDKIQNEMTYPGQVKVTVIRETRAINIAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaatacataataataggaatcataggattgttggtaggaggattgattgcctacata
ctgacaaagaagcagttagataaccgaagcgaaattctctataacgaggcaaaacaaaaa
gcagatttattagaaaaagaagccaatcgcataaaactcgaagccgaaagcaagcttaaa
gaagccaataccgaaggcgagagtattaaaaaagagaaaatattacaagctaaagagaaa
tttttagaactaaaagcacaacacgaagaggcagtaaatcagcgagaaaagaaaatctct
gacagagaaaaagtaatcaaagaaaaagaacataaattaaacgaagggctagcagagctt
aagaaaaatagaaaatccctgacttctgaaatcgaagtttttgaagaaagaagaattgca
ttgcaccgcaaaatcgatgaggtaaatgccaatcataaacgccaagtagagctattagaa
aaaatctcgggttattccgcagatgaggcgcgcgaagaattagttcaatcattaaaagat
gaagctaaaaccaaagcgcaagcacacatccaagagattatggacgaggcaaatatgaac
gctcgggaagaagcgcgcaagattgtaattcagtcgattcagcgaatcgggacagagcaa
gcggtggaaaatgccgtatctgtatttaatcttgaaaacgatgatatcaaaggtagaatc
attgggcgcgagggaagaaacattcgtgccatcgaggcagccactggggtagaaatcatt
gtagatgatacgccagaggctattgtgctttcatgttttgaccctattcgtagagagatt
gctcgcttgtcgatgcacaaactcgtaaccgatggtagaattcacccaggtagaatcgag
gaagttgtggctaaaacgacaaagcaaatcgaggaggaaatcgtgaatgtaggaaagaaa
accgtaatagatttaggaattcatggtttaaatccagagttgattcgtatcgttgggcgt
atgaaataccgttcttcttacgggcaaaaccttttgcagcactctcgtgaggtggcgcac
attgcaggtactttagcggcagaattggggttgaatgccaaattggctaagcgtgcaggg
ttgttgcacgacatcgggaaagtgccagagcaagaatctgaattgccacacgctattttg
ggtatgcaatgggcagagaaatttggagaaaatccagaagtggtgaatgccattggagcg
caccacgacgagattgaaatgacttcgttattgtctcctattgtgcaagttgcagatgcg
attagtggagcaagaccaggcgcaagacgccaagtcgtggagtcatacattcagcgatta
aaagatttagaaaataccgctttaggatttgagggcgtgcaaaaagcttatgcaattcag
gcgggtagagagctccgtgtaatggtggattgcgaaaaagtggacgatgctagagccaac
gaattatctttcttgattagtgataaaattcaaaatgaaatgacttatccagggcaagtg
aaagttaccgtaattcgtgagacacgcgccatcaatattgcaaaataa
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