Ornithobacterium rhinotracheale ORT-UMN 88: Q785_09820
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Entry
Q785_09820 CDS
T03303
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ori
Ornithobacterium rhinotracheale ORT-UMN 88
Brite
KEGG Orthology (KO) [BR:
ori00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ori03400
]
Q785_09820
Enzymes [BR:
ori01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Q785_09820
DNA repair and recombination proteins [BR:
ori03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Q785_09820
Prokaryotic type
Q785_09820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AIP99888
LinkDB
All DBs
Position
complement(1975381..1976754)
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AA seq
457 aa
AA seq
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MNTYLDFRGFFGLNPQNRYLTHMKDYVIHWFRRDLRLKDNTALHHAIQHKIPVKCIFIFD
TEILKHLPKQDKRVGFILQQLLALKKSLRKLNSDLLILKGNPSEIWKDLAQDSHLKAVFT
NRDYEPYALQRDEKVQRLLTQKNIEFHTFKDQIIFEKNEVLTQAGEPYKVYTPYKNQWKK
ILEPARDLKAFPIALEKSNFYTFFNDDFETLESIGFENVEIPNLPTDLQNINIDHYEKER
DLPYLNDGTSKLGTALRFGTLSIREAMRYAMQHNETFWNELIWREFFSQVLGHYPEVVSK
AFKPKYDFIAWRNNEQEFELWCQGKTGVPIVDAGLRELNATGFMHNRVRMIVGSFLVKNL
LIDWRWGEAYFAEKLMDFDLASNNGNWQWVAGCGTDAAPYFRVFNPITQAEKFDPNQKYI
KKWIPEWGTAKYPEPMVDLKSSRLRCLEVYKKAVKSS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
ttgaacacttatttagattttcggggattttttgggctaaatcctcaaaatcgttatctt
actcacatgaaggattatgtaattcattggtttcgtagagatttaagactaaaggacaat
accgcactacaccacgccattcagcacaaaatacccgtaaaatgtatttttatttttgac
accgaaattctaaaacatttgcccaagcaagacaagcgtgttggctttatcttgcagcaa
cttttagccttaaaaaagtccttgcgaaagctgaattcagacttattaatcctaaaagga
aatccctccgaaatttggaaagatttagcccaagattcacatctaaaggctgttttcacc
aatcgtgattatgagccctacgcgctccagcgagatgaaaaagtgcaacgacttttaacc
caaaaaaatatcgaatttcacacctttaaagaccaaattatttttgagaaaaacgaagtg
ctcacgcaagcgggcgagccttataaagtgtacacgccctacaaaaatcaatggaaaaag
attttggaacccgctcgggatttaaaggcgtttcccatagcactcgaaaaatccaatttt
tataccttttttaatgatgattttgaaacgctggagagcatagggtttgaaaatgtggaa
attcctaatttgcccaccgatttgcaaaacatcaatatcgatcattacgaaaaagagcga
gatttgccttacttaaacgacggcacttccaagctcggcacggctttgcgttttgggact
ttgagcatacgagaagccatgcgctatgccatgcagcacaacgaaactttctggaacgaa
ttgatttggcgcgagtttttcagtcaagttttggggcattatccagaagtggtttctaag
gcttttaaaccaaaatacgattttattgcttggcgaaacaacgagcaggaatttgaactt
tggtgccaaggaaaaacgggcgttcctattgtggatgcgggtttgcgagagctgaacgct
acgggctttatgcacaaccgtgtacgcatgattgtggggagttttttggttaaaaatctc
ttgattgattggcgatggggcgaggcttattttgccgagaaattaatggattttgacttg
gcatctaacaacggaaattggcaatgggtggcaggttgtggcaccgatgctgccccatat
tttagagtatttaaccccattacgcaggcagaaaagtttgacccaaatcaaaaatatatc
aaaaaatggattcctgaatggggcacggctaaatatcccgagcctatggtggatctaaaa
tctagccgactgcgttgtttggaagtctataaaaaagcggtgaaatcctcttaa
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