Ornithobacterium rhinotracheale ORT-UMN 88: Q785_11915
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Entry
Q785_11915 CDS
T03303
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ori
Ornithobacterium rhinotracheale ORT-UMN 88
Pathway
ori03420
Nucleotide excision repair
ori03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ori00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Q785_11915
03430 Mismatch repair
Q785_11915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ori03400
]
Q785_11915
Enzymes [BR:
ori01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Q785_11915
DNA repair and recombination proteins [BR:
ori03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Q785_11915
MMR (mismatch excision repair)
Other MMR factors
Q785_11915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
ResIII
DEAD
AAA_11
DUF4883
Motif
Other DBs
NCBI-ProteinID:
AIQ00210
LinkDB
All DBs
Position
2381096..2383429
Genome browser
AA seq
777 aa
AA seq
DB search
MGSNYLDELNDVQRQAVEATEGPVMVIAGAGSGKTRVLTYRIAHLINQGVDSFNILALTF
TNKAAREMKERIAKVVGVSEAKNIWMGTFHSIFARILRVEAPLLGYPSNFTIYDQQDALS
ILKKVIKDMNLDQDVYKPKQILNRISQFKNNLITVRAYFNNPEIMEADAIALRPQTGEIY
KRYVEKCFKSGGMDFDDLLLRTNEVLTRFPDVLAKYQNRFKYILVDEYQDTNHSQYLIVK
ALASRFENICVVGDDAQSIYAFRGANIRNILNFNKDYKDAQSFALEQNYRSTQNIVNAAN
DIIAKNRDQLKKNVWTSNDAGAKIPVYRALTDMDEARYIAAQIFEKKMQNQYNNSDFAVL
YRTNAQSRAIEEALRKKNIPYRIYGGMSFYQRKEVKDLIAYLRLLVNPNDEEALMRIINY
PVRGIGNTTQQALTVFADKVGKPVIEILFNLQFYAPQLKLNARAFNSLNNFATMIQSFAV
KLKTGDVYEVALQVAKESGMLKTLSDDDTPEGRSRLENLQELLNSLQGYVEEQSQIEGGN
PTLQGFLEDAALSTDADKDETDTDKVSLMTVHLAKGLEFPVVFVVGLEENLFPSQMNLNS
RQELEEERRLFYVALTRAEKEAMLSYSVSRSRWGKIVDAEPSRFLEEISDQYLDWKNPSP
VTPMNSTGLSADLFGDDFPTFTRKEKNEPISYKRKIKKALPSTSNHNLKKLSEAKLQAGD
SANQSLKVDSVVLHDRFGRGVVKSIEGEVGDEKAIVNFENAGEKKLLLRFAKLRIVG
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtaactatttagatgaattaaatgatgttcaacgccaagccgtagaagctacc
gaaggacccgtaatggtgattgcaggagcaggttctggaaaaacacgagttttaacttat
cgcattgcacacttaatcaatcaaggggtagatagctttaatattctagcactcaccttt
accaacaaggctgctcgcgagatgaaggagcgtatcgctaaagtggtgggcgtgagcgaa
gctaaaaacatctggatgggaacttttcactccatttttgcaagaattttgcgtgtggaa
gcccctcttttgggctacccgtctaattttacgatttatgaccagcaagatgcactttca
attttaaagaaggtaatcaaggacatgaatctagaccaagatgtgtataaacccaaacaa
attctcaaccgaatttctcagtttaaaaacaacttaatcacagtgcgtgcctatttcaat
aatccagaaatcatggaggcagacgccattgcactgcgaccacaaacgggcgaaatctat
aaacgctatgtggaaaaatgctttaaatctggcggaatggattttgatgatttattactg
cgtaccaacgaggttttaactcgctttcccgatgttttagccaaataccaaaaccgattt
aaatacattttggtagatgagtatcaggataccaaccattctcagtatttaattgtaaaa
gctttggcttcaaggttcgagaatatttgtgtagtgggcgacgatgcgcagtcgatttat
gcgttccgtggggcaaatattcgtaacattttaaattttaataaagattataaagatgca
caatcttttgccttggaacaaaattatcgttcaactcaaaatattgtaaacgcggcaaac
gatattattgccaaaaacagagatcagctcaagaaaaatgtatggacttccaacgatgcg
ggggcaaaaattcccgtgtatcgtgccttgaccgatatggacgaggctcgctacattgcg
gcacagatttttgaaaagaaaatgcaaaatcagtacaataatagtgattttgctgtgttg
tatcgtaccaatgcacagtcgcgagcgatagaggaggcgttgcgcaaaaaaaatattccg
tatagaatttatggcggcatgtcgttttaccaaagaaaagaggtaaaggatttaatcgct
tatctgcgattgctcgtgaatccaaacgacgaggaggctttgatgcgaatcataaattat
cccgtgcgtggcatcgggaacacaacgcaacaggcacttactgtttttgcagacaaagtg
ggcaagcctgtcatcgaaattttatttaatttacagttttatgcaccacaattaaagtta
aacgcccgagcatttaattcgttaaataattttgcaacgatgattcaaagttttgccgta
aaattgaaaacgggcgatgtgtatgaggtagcattgcaggtggcaaaagagtctggcatg
ctcaaaacattgagcgatgatgatacgccagaaggtcgttcaagactggaaaacttgcaa
gagttgctaaacagtttgcagggctatgtagaggagcaaagccaaatcgagggaggaaat
cccactttgcaaggatttttggaagatgcggcactctctaccgatgccgacaaagatgaa
accgataccgataaagtttcgctgatgacggtgcatttggcaaaaggtttggagtttcct
gtggtttttgtcgtgggcttggaggaaaatttattcccatctcaaatgaatttaaactct
cgccaagagcttgaagaagaacgccgcttgttttatgtagcactcacacgtgccgagaaa
gaagccatgctctcttattccgtttcgcgtagccgttggggcaaaattgtagatgccgaa
ccgagccgatttttggaagaaattagcgatcaatatctggattggaagaacccaagtcct
gtaacgcctatgaacagcacagggctttcggcagatttgtttggtgatgattttccaact
tttacccgaaaagagaagaacgaaccgatttcgtacaaacgaaaaatcaaaaaagctttg
ccgagcacaagcaatcataatttaaagaaattgagcgaagcaaaattgcaagcgggcgat
tctgccaatcaatcactgaaagtggacagcgtagtgctacacgaccgatttggtagaggc
gtggtgaaaagcattgagggcgaagtgggcgatgaaaaagccattgtaaactttgaaaac
gctggcgaaaagaaattacttctgcgctttgccaaactcagaattgtaggataa
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