Oricola thermophila: HTY61_05665
Help
Entry
HTY61_05665 CDS
T06643
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
orm
Oricola thermophila
Brite
KEGG Orthology (KO) [BR:
orm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
orm03032
]
HTY61_05665 (topA)
03400 DNA repair and recombination proteins [BR:
orm03400
]
HTY61_05665 (topA)
Enzymes [BR:
orm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HTY61_05665 (topA)
DNA replication proteins [BR:
orm03032
]
Prokaryotic type
DNA Topoisomerases
HTY61_05665 (topA)
DNA repair and recombination proteins [BR:
orm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HTY61_05665 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QKV17984
UniProt:
A0A6N1VAL2
LinkDB
All DBs
Position
complement(1182241..1184862)
Genome browser
AA seq
873 aa
AA seq
DB search
MDVVVVESPAKAKTINKYLGSGFKVLASFGHVRDLPAKDGSVRPDEDFAMDWSVDTASNK
RLNEIAAAMKEADALILATDPDREGEAISWHVLEVLNKKKALKGKPVRRVVFNAITKKAV
TEAMANPRDIDMPLVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ESEIERFKPEEYWQIAAHLKTEGGQPFVARLTGFDGKRITKMDIGDGDHAATIKAMLESA
AFTVESLEAKPQKRNPAPPFTTSTLQQAASAKLGFAPARTMQVAQRLYEGVDVGGETVGL
ITYMRTDGVQMAPEAITGARDAIAKEFGTNYLPESPRLYSTKAKNAQEAHEAIRPTDFMR
TPSSVRGSLDGDQMKLYELIWKRGIASQMASAEMERTTVEIVAKGEGKTATLRATGSVVK
FDGYLAAYTEHRDDMKTDAEEEDDSNRLPAMRTGEQPLREKIDATQHFTEPPPRYSEASL
IKKMEELGIGRPSTYSATLTTLRDREYVKLDGKKLIPEAKGRLVTAFLEDFFSRYVEYDF
TASLEEKLDDISAGKLNWKDVLRDFWQEFSAHVEETKELRITDVLDALNEQLEPLVFPPR
PDGSDPRICPKCGTGKLSLKLGRYGSFVGCSNYPECNFTRQLGEEGPNGEAGDLSDGPKL
LGTDPYTNEEITLRTGRFGPYVQRGDGKEAKRASLPKGWKVEDIDHEKALALLSLPRDIG
QHPESGKMISAGIGRYGPFVLHDGVYANLESVEDVFTIGLNRAVTVLAEKVAKGPGRGRS
TPAALKELGEHPEVGGPVTVRDGRYGPYVNHGKINATIPKNTDPMSVTLEDAVKLIAERA
EKSGKKVGGAKAKKAPAKKKAPAKKKAAAKADG
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcgtcgtcgtagaatcgcccgccaaagcgaaaaccatcaacaagtatctcggc
tccgggttcaaggtcctggcctcgttcggtcacgtccgcgacctgccggccaaggacggt
tcggtgcgcccggacgaggacttcgcgatggactggagcgtcgacacggcatcgaacaag
cggctgaacgaaatcgcagccgccatgaaggaagccgatgcgctgattctcgcaaccgac
cccgatcgcgagggagaagcgatttcctggcacgtcctggaggttctcaacaagaaaaag
gcattgaagggcaaaccggtccggcgcgtcgtcttcaacgccatcacgaagaaggccgtc
acggaagcgatggccaatccgcgcgacatcgacatgcccctggtcgatgcctatctcgcg
cgccgtgcgctcgactatctcgtcggcttcacgctgtcacccgtcctctggcgcaagctt
cccggcgcccgctccgccgggcgtgtccagtcggtggcgctgcgtctggtctgcgaccgc
gaatccgagatcgagcgcttcaagcccgaggaatactggcagatcgccgcccatctgaag
acggagggcggccagccattcgtcgcacgcctgaccggtttcgacggcaagcgcatcacc
aagatggatatcggcgatggcgatcatgccgcgaccatcaaggcgatgctggaatcggcg
gcattcaccgtcgagtcgctcgaagccaagccgcagaaacgcaatccggccccgcccttc
accacctccacgctacagcaggcggcatccgccaagctcggctttgcgccggcacgcacg
atgcaagttgcgcagcgtctgtacgaaggcgtcgatgtcggcggcgagaccgtcggtctg
atcacctacatgcgtaccgacggtgtccagatggcaccggaggcaatcaccggcgcacgc
gacgccatcgccaaggaattcggcacgaactacctgccggaaagcccccgcctctattcg
accaaggccaagaacgcacaggaagcgcacgaggcaatccgtccgaccgatttcatgcgc
actccctcatcggtgcgcggctcgctcgacggcgaccagatgaagctctacgagctgatc
tggaagcgcggcatcgccagccagatggcatccgcggaaatggagcgcaccacggtcgag
atcgtcgccaagggcgaaggaaagacggcgacgctgcgcgcgaccggttctgtcgtcaag
ttcgacggctaccttgccgcctataccgagcaccgcgacgacatgaagacggatgcggag
gaagaggacgactcgaaccggctcccggcaatgcgcacgggcgagcaacccttgcgcgag
aagatcgacgcgacgcagcacttcacggaaccgccgccgcgctactcggaagcctcgctg
atcaagaagatggaagagctcggcatcgggcggccgtccacctattcggcaaccctgacg
acactgcgcgaccgcgaatacgtcaagcttgacggcaagaaactgatcccggaagccaag
ggccgcctggtcacggctttcctggaggatttcttctcgcgctacgtggagtacgacttc
accgcgtcactggaggaaaaactcgacgacatctcagccggcaagctgaactggaaggac
gttctgcgcgacttctggcaggaattctccgcccatgtcgaggaaacgaaggaacttcgt
atcacggacgtgctggacgcgctgaacgagcagctggaaccgctcgtgttcccgccgcgt
cctgacgggtctgacccgcgcatctgtccgaaatgcggaaccgggaaactgagcctgaag
ctcggacgctacggttcattcgtcgggtgctccaactatccggaatgcaactttacccgg
caacttggcgaggaaggcccgaacggcgaggccggcgacctttcggacgggccgaagttg
ctgggaaccgatccctacaccaacgaggaaatcacgctgcgcaccggccgtttcggcccc
tatgtccagcggggcgacggcaaggaggccaagcgcgccagcctgcccaagggatggaag
gtcgaggacatcgaccacgagaaggcgctagcgctgctctcgctgccacgcgacatcggc
cagcatccggagtcgggcaagatgatttccgccggaatcggccgctacggccccttcgtg
ctgcatgacggcgtttatgcgaacctggaaagcgtcgaggacgtgttcacgatcggcctc
aaccgcgcggttacggtgctggcggaaaaggtcgccaagggccccggacgcgggcgctcg
acgccggcagccctgaaggagcttggggagcatccggaggtcggaggcccggtgaccgtg
cgcgacggacggtacggcccctatgtcaatcacggcaagatcaacgcgacgatacccaag
aacaccgatcctatgtcggtgacgctggaggatgcggtcaagctgattgccgaacgggcc
gagaaatccggcaagaaggtcggcggagccaaggcgaagaaggcgcccgccaagaagaaa
gctccggccaagaagaaggccgcagcgaaggccgatggctag
DBGET
integrated database retrieval system
