Oricola thermophila: HTY61_06975
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Entry
HTY61_06975 CDS
T06643
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
orm
Oricola thermophila
Pathway
orm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
orm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HTY61_06975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
orm03021
]
HTY61_06975
03400 DNA repair and recombination proteins [BR:
orm03400
]
HTY61_06975
Enzymes [BR:
orm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HTY61_06975
Transcription machinery [BR:
orm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HTY61_06975
DNA repair and recombination proteins [BR:
orm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HTY61_06975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
Motif
Other DBs
NCBI-ProteinID:
QKV18215
UniProt:
A0A6N1VF09
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All DBs
Position
complement(1445382..1446392)
Genome browser
AA seq
336 aa
AA seq
DB search
MIHKNWQELIKPKKVEFKSDGTNKVTLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIAGVREDVTDIVLNIKEIAIRMEGDGPKRMVVRKQGPGAVTAGDIQTVG
DVEILNPDHVICTLDEGAEIRMEFTVDNGKGYVPADRNRAEDAPIGLIPVDSLYSPVRKV
SYKVENTREGQVLDYDKLTMTIETNGAVSGEDAVAFAARILQDQLGVFVNFEEPQKEVEE
ETVQELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEGEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDHY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgatacacaagaactggcaagaactgatcaagccgaagaaggtcgagttcaagagcgac
ggcaccaacaaggtgacgctcgtcgccgaaccgctcgagcgcggcttcggtctcactctc
ggaaatgcgctgcgccgcgttctgctgtcttctctgcggggcgccgcggtgaccgccgtg
cagatcgacggtgtgctgcatgaattctcttcgatcgcaggcgtgcgcgaggatgttacg
gatatcgttctgaacatcaaggaaatcgccatccggatggaaggcgacggcccgaagcgc
atggttgtccggaagcagggcccgggtgctgtgaccgctggcgacattcagactgtcggc
gatgtcgagatactcaatccggatcacgtgatctgcacgctcgacgaaggtgcggaaatc
cgcatggaattcaccgtcgacaatggcaagggctacgtgcctgccgaccgcaatcgcgcc
gaggatgcgccgatcggtcttattccggtcgacagcctctattctccggtccgcaaggtc
tcctacaaggtggaaaacacccgtgaaggccaggtcctcgactacgacaagttgaccatg
acgatcgagaccaacggagcggtttcgggcgaggatgcggtcgcgttcgcggcccgtatc
ctgcaggatcagctcggtgtgttcgtcaacttcgaagagccgcagaaggaagtggaggag
gagaccgttcaggaactcgccttcaatccggcgcttctcaagaaggtcgacgagttggag
ctctcggtgcgctcggcgaattgtctcaagaacgacaatatcgtctacatcggcgatctt
atccagaagaccgagggcgaaatgctgcggactccgaatttcggtcgcaagtcgttgaac
gaaatcaaggaagtgctggcgtccatgggcctccatctcggtatggaagtgcccgcctgg
ccgccggaaaacatcgaagacctcgcgaagcgttacgaggatcactactga
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