Oricola thermophila: HTY61_14240
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Entry
HTY61_14240 CDS
T06643
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
orm
Oricola thermophila
Pathway
orm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
orm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HTY61_14240 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
orm03019
]
HTY61_14240 (pnp)
03016 Transfer RNA biogenesis [BR:
orm03016
]
HTY61_14240 (pnp)
Enzymes [BR:
orm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HTY61_14240 (pnp)
Messenger RNA biogenesis [BR:
orm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HTY61_14240 (pnp)
Transfer RNA biogenesis [BR:
orm03016
]
Prokaryotic type
tRNA degradation factors
HTY61_14240 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QKV19530
UniProt:
A0A6N1VEZ6
LinkDB
All DBs
Position
complement(2963955..2966084)
Genome browser
AA seq
709 aa
AA seq
DB search
MFKNHKVEIEWGGRPLILETGKIARQADGAVLATYGETVVLATVVSAKEPKPGQDFFPLT
VNYQEKAFAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFPDGYKCDTQVVITVLQH
DLENNPDVLAMVAASAALTLSGVPFMGPIGGARVGYINGEYVLNPHVDEMVESDLDLIVA
GTGDAVLMVESEAGELDEETMLGAVMFGQAGFQPVIKAIIKLAEVAAKDPREFEPEDLSA
LETEMENLVSGELAEAYTITDKQDRYAAIDAVKDRVKGHFAPAEGEEAKWTPEQIGSVFK
SLQAKVVRGNILRTKTRIDGRDLSTVRPIVAEVGVLPRTHGSAVFTRGETQALVVATLGT
GEDEQYVDSLMGTYKETFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIHPMLPSA
EEFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLKAPVAGIAMGLIKEGDEFAVL
SDILGDEDHLGDMDFKVAGTSKGVTSLQMDIKIQGITEEIMKVALGQARDGRLHILGEMA
KAISESRSELGEFAPRIEQIQIPVDKIRDVIGSGGKVIREIVEQTGAKINIDDDGTVKIA
SASGKEIEAAKKWIHSIVAEPEVGEIYEGTVVKTTDFGAFVNFFGPRDGLVHISQLAPER
VAKTTDVVKEGDKVYVKLMGFDERGKVRLSMKVVDQESGKEIAREDNAD
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaatcacaaggtcgaaatcgaatggggtgggcgtccgctcattctcgaaacc
ggcaagatcgcccgtcaggctgacggcgcggttctggccacctatggcgagaccgtcgtg
cttgccaccgtcgtctccgccaaggagccgaagccgggccaggacttcttcccgctgacc
gtcaactaccaggaaaaggcgttcgccgcgggcaagatcccgggcggctatttcaagcgc
gagggtcgtccgtcggaaaacgagacgctggtctcccgcctgatcgaccgtccgatccgc
ccgctctttccggatggctacaagtgcgacacccaggtggtcatcaccgtcctgcagcat
gacctggaaaacaatccggacgtgctggcgatggtcgccgcttccgccgcccttacgctt
tccggcgtgcccttcatgggcccgatcggcggcgcgcgcgtcggctacatcaacggcgaa
tacgtgctgaacccgcatgtcgacgagatggtggagagcgatctcgacctcatcgtcgct
ggcaccggtgatgccgtgctcatggtggaatcggaagctggcgagctcgacgaggaaacc
atgctcggcgccgtcatgttcggtcaggcaggcttccagccggtcatcaaggcgatcatc
aagctcgccgaggttgcggcgaaggacccgcgcgaattcgagccggaagacctttccgcg
ctcgagaccgagatggagaacctggtttccggcgaactcgccgaggcctataccatcacc
gacaagcaggatcgctacgccgcgatcgacgccgtcaaggatcgcgtaaagggccatttc
gctcccgccgagggcgaggaggcgaagtggacgcctgaacagatcggctccgtcttcaag
tcgctgcaggcaaaggtcgtgcgcggcaacattctccggaccaagacccggatcgacggc
cgcgacctttcgaccgtccgcccgatcgtggcggaagtcggcgtcctgccgcggacccac
ggctcggccgtgttcactcgcggagagacgcaggcgctcgtcgtcgcgacgctcggcacc
ggcgaggacgagcagtatgtcgactctctgatggggacctacaaggaaaccttcatgctg
cactacaacttcccgccctattccgtgggcgagacgggccgcatggggtctccgggccgc
cgcgagatcggtcacggcaagctggcctggcgcgccattcacccgatgcttccgagcgcc
gaggaattcccctacacgctgcgcgtggtctccgagatcaccgagtccaacggctcgtct
tcgatggcgactgtttgcggtacctccctggcgctgatggatgccggcgttccgctgaag
gctccggtggccggcatcgcgatgggcctgatcaaggaaggcgacgagttcgcggttctt
tccgacattctcggcgacgaggatcatctcggcgacatggacttcaaggttgccggtacc
tcgaagggcgtcacctcgctgcagatggacatcaagatccagggcattaccgaggagatc
atgaaggtcgctctcggccaagcccgcgacggccgcctgcatatcctcggcgagatggcc
aaggcgatctcggaaagccgctcggagctcggcgagttcgcgccgcgcatcgagcagatc
cagatcccggtcgacaagatccgcgacgttatcggttccggcggcaaggtgatccgcgag
atcgtcgagcagactggcgccaagatcaatatcgacgacgacggtactgtgaagatcgcc
tccgcctccggcaaggagatcgaggcagccaagaagtggatccactccatcgttgccgaa
ccggaagttggcgagatctacgagggtacggtcgtcaagaccaccgatttcggtgccttc
gtcaacttcttcggtccgcgcgacggcctcgtgcacatctcgcagctggcgccggagcgc
gtcgccaagacgaccgatgtcgtcaaggaaggcgacaaggtctacgtcaagctgatgggt
ttcgacgagcgaggcaaggttcgcctgtcgatgaaggtggtcgaccaggagtcgggcaag
gaaatcgccagggaagacaatgccgactga
DBGET
integrated database retrieval system
