Ornithinimicrobium avium: DV701_00515
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Entry
DV701_00515 CDS
T05559
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
orn
Ornithinimicrobium avium
Pathway
orn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
orn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DV701_00515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
orn03400
]
DV701_00515
Enzymes [BR:
orn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DV701_00515
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DV701_00515
DNA repair and recombination proteins [BR:
orn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DV701_00515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DUF7573
TackOD1
Motif
Other DBs
NCBI-ProteinID:
AXH94862
UniProt:
A0A345NIK4
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All DBs
Position
106381..107283
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AA seq
300 aa
AA seq
DB search
MPELPEVEVVRRGLVDHVVGRTVERARLTGVRVARRHVAGPEDLAARVTGAKVVAADRRG
KYLWMVLQPPHDDPQALVVHLGMSGQLLVEAAGAPPEKHLHATFDLADGGTQLRFVDQRT
FGGLALAPLRPDRYAVPGAHGHGIPEPVVHIAPDPLEPAFDRAATVRRIKARDSEVKRVL
LDQGVVSGVGNIYADEALWRAGVHGSRSGSALTRPAIGRLLDHAAEVMREALDQGGTSFD
ALYVNVNGASGYFDRALAVYGQTGRPCPRCGTTVVRQEFMNRSSHFCPRCQPRPRRHRAG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagcttcccgaggtcgaggtcgtccgccgcggcctggtcgaccacgtggtcggc
cgcaccgtcgagcgggcccggctgaccggcgtgcgcgtcgcgcgtcggcacgtcgccggg
cccgaggacctcgccgcccgcgtcaccggggcgaaggtggtcgccgccgaccgccgcggc
aagtacctgtggatggtcctccagccgccccacgacgacccgcaggccctggtcgtgcac
ctcggcatgagcggccagctcctcgtcgaggccgccggcgcgccgcccgagaagcacctg
cacgcgaccttcgacctcgccgacggcggcacccagctgcgcttcgtcgaccagcgcacg
ttcggcgggctggcgctcgccccgctccggcccgaccggtatgccgtgcccggggcgcac
gggcacggcataccggagccggtcgtgcacatcgcgccggacccgctcgagccggccttc
gaccgggccgccaccgtccggcggatcaaggccagggacagcgaggtcaagcgggtgctg
ctggaccagggcgtggtcagcggggtgggcaacatctacgccgacgaggcgctgtggcgc
gccggcgtgcacggctctcgcagcgggtccgccctcacccggccggccatcggccggctg
ctcgaccacgccgcggaggtcatgcgcgaggcgctggaccagggcgggacgagcttcgac
gcgctctacgtcaacgtcaacggggccagcggctacttcgaccgggcgctggcggtctac
gggcagacggggcggccctgcccgcggtgcggcacgaccgtggtccggcaggagttcatg
aaccgctcctcgcacttctgcccgcgctgccagccccgcccgcggcggcaccgggccggc
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