Ornithinimicrobium avium: DV701_01055
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Entry
DV701_01055 CDS
T05559
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
orn
Ornithinimicrobium avium
Pathway
orn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
orn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DV701_01055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
orn03019
]
DV701_01055
03009 Ribosome biogenesis [BR:
orn03009
]
DV701_01055
Enzymes [BR:
orn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
DV701_01055
Messenger RNA biogenesis [BR:
orn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DV701_01055
Ribosome biogenesis [BR:
orn03009
]
Prokaryotic type
rRNA processing factors
DV701_01055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AXH94951
UniProt:
A0A345NIU3
LinkDB
All DBs
Position
229069..231936
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AA seq
955 aa
AA seq
DB search
MHPHRAGERAGSAPRCGLGRAAEEGHTVSDETDRTTDVEQAPGDDRHDRAVALIAETQAL
FTAATFPARGSDPQDDQDLAAADDDEDTNDDSDDDSDSDSDSDDTDEDGSADGTAGQSVP
SFGVLFQAPDLSDVPRRRSRRATSAVTAPVERQDEDEDDQTHDEGSDDSGEDDGPGSRAG
RRRRRGGKGRRGRTSSDQGEDDDDGSQSAGSADAGGKEQTESTDQGETEQEGSGTARRRS
RRGRGTGTGQHDDGRSADAKDEASAEDAGTSEDDDSSSTRRRRRRRRSGESGSGERSARD
EVTSLKGSTRLEAKRQRRREGREAGRRRTIITEAEFLARRESVERVMVVRGLEDRTQIAV
LEDGVPVEHYVSRSAQTTMAGNVYLGRVQNVLPSMEAAFVDIGKGRNAVLYAGEVNWDAA
GMSSGQPKRIENALKSGQTVLVQVTKDPIGHKGARLTSQVSLPGRYLVYVPGSSMTGISR
KLPDTERARLKKILKEVVPDDVGVIVRTAAEGASEAELRADVERLSSTWERIQKKSGSAN
APALLHGEPDMTVRVIRDVFTEDFAKLVVAGDEAWTEVKRYIDDVAPDLADRVEKHTGTQ
DAFTAYRVHEAIAKAMDRKVWLPSGGSLVIDRTEAMTVVDVNTGKFTGSGGNLEETVTKN
NIEAAEEIVRQLRLRDIGGIIVIDFIDMVLESNRDLVVRRLLECLGRDRTKHQVAEVTSL
GLVQMTRKRVGSGLIEVFSETCAHCAGRGIIVQTEPAHRHGNGNGGSEDSGGRRGRSKGR
SGSSSGGGEGRTAQQPSKPTGPTPAQIAAAAHAAAVQAGEKPVAAETAADPVAGGQAMST
PGTAVEQAVSEQAVSEQAATEQPATKRRAAKRSPARPAAEQPAAEQPAAEQPADERSADQ
EPAADEPAREPAPVVEAALAPAPKRRRRGRVVAPAGPPTGAPEGGPATGPATDPA
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
ctgcacccgcaccgcgcgggggagcgggccggatcggccccgaggtgtgggctcggccgt
gcggctgaggaaggacacaccgtgtctgacgagacggaccgcaccaccgacgtggaacag
gcaccgggcgacgaccggcacgaccgggccgtggcgctcatcgccgagacccaggccctg
ttcaccgccgcgacgttcccggcgagggggtcggacccccaggacgaccaggacctcgcc
gccgccgacgacgacgaagacaccaacgacgacagcgacgacgacagcgacagcgacagc
gacagcgacgacacggacgaggacgggtccgcggacgggacggccggtcagagcgtgccg
tccttcggtgtcctcttccaggcgcctgacctcagcgacgtgccgcgccggcgctccagg
cgcgcgacgtcggccgtgaccgccccggtcgagcggcaggacgaggacgaggacgaccag
acccacgacgagggatccgacgactccggcgaggacgacggcccgggttctcgcgccggt
cgtcgccggcgccggggcggcaagggacggcgcggccgaacctcttccgaccagggggag
gacgacgacgacgggtcgcagtccgccggctcggccgacgccggcgggaaggagcagacc
gagagcaccgaccagggggagacggagcaggagggcagtggcaccgcgcgtcgtcgcagc
cgccggggacggggcaccggcaccggccagcacgacgacggccggtccgcggacgcgaag
gacgaggcgagcgccgaggacgccggcacctcggaggacgacgactcctccagcacccgg
aggcggcgccgccgccggcgcagcggggagtccggctccggcgagcggtcggcacgcgac
gaggtgacctcgctgaaggggtcgacccggctggaggccaagcgccagcgccggcgggag
ggccgcgaggccggccggcgtcgcacgatcatcaccgaggcggagttcctcgcgcggcgc
gagagcgtcgagcgcgtcatggtcgtgcgcggcctggaggaccggacccagatcgcggtg
ctcgaggacggcgtgccggtggagcactacgtgtcccgctcggcgcagaccacgatggcc
ggcaacgtctacctcgggcgggtgcagaacgtgctgcccagcatggaggcggccttcgtc
gacatcggcaagggacgcaacgccgtcctctacgccggtgaggtgaactgggacgcggcc
ggcatgtcctccgggcagcccaagcgcatcgagaacgccctgaagtccggtcagacggtc
ctggtccaggtgaccaaggacccgatcgggcacaagggtgcccggctcacctcgcaggtc
tcgctgccggggcgctacctggtctacgtgcccggcagctcgatgaccggaatctcgcgc
aagctgccggacaccgagcgcgcccggctgaagaagatcctcaaggaggtcgtcccggac
gacgtgggcgtgatcgtccgcacggccgccgagggcgcctcggaggccgagcttcgcgcc
gacgtcgagcggctctcctccacctgggagcggatccagaagaagtccgggagcgccaac
gcccctgcccttctccacggggagccggacatgaccgtccgggtcatccgtgacgtcttc
accgaggacttcgccaagctcgtggtcgccggcgacgaggcctggaccgaggtcaagcgc
tacatcgacgacgtcgcccccgacctcgccgaccgcgtcgagaagcacaccggcacccag
gacgccttcacggcctaccgcgtgcacgaggcgatcgccaaggcgatggaccgcaaggtg
tggctgccctccggcggctccctggtcatcgaccgcaccgaggcgatgaccgtcgtcgac
gtcaacaccggcaagttcaccggctccgggggcaacctcgaggagacggtgaccaagaac
aacatcgaggcggccgaggagatcgtgcgccagctgcggctgcgggacatcggcggcatc
atcgtcatcgacttcatcgacatggtgctggagagcaaccgcgacctcgtcgtgcgtcgg
ctcctggagtgcctgggccgggaccggaccaagcaccaggtggccgaggtgacctccctc
ggcctggtccagatgacccgcaagcgggtcggctccggtctcatcgaggtcttctccgag
acctgcgcccactgcgccggccgggggatcatcgtgcagaccgagccggcgcaccgccac
gggaacggcaacggcggctccgaggactccggcggccgacgcggccgcagcaagggccgg
tccggctcgtcctccggcggcggcgagggcaggactgcccagcagccgtcgaaaccgacc
ggaccgacgccggcgcagatcgcggccgcggcgcacgcggcggcggtgcaggccggcgag
aagccggtcgcggccgagacggccgccgacccggtggccggggggcaggccatgtccacg
cccggcactgcggtcgagcaggctgtctccgagcaggctgtctccgagcaggctgcgacc
gagcagccggccaccaagcggcgcgcggccaagcggtcccccgcgaggccggccgccgag
cagccggccgccgagcagccggccgccgagcagccggccgacgagcgttccgctgaccag
gagccggccgctgacgagcccgcacgtgagcccgccccggtggtggaggccgcactggct
cccgccccgaagcggcgtcggcgaggccgcgtggtcgcacccgccgggcccccgaccggg
gcccccgagggcgggccggcgaccgggccggcgaccgaccccgcctga
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