Ornithinimicrobium avium: DV701_04590
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Entry
DV701_04590 CDS
T05559
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
orn
Ornithinimicrobium avium
Brite
KEGG Orthology (KO) [BR:
orn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
orn03400
]
DV701_04590
Enzymes [BR:
orn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DV701_04590
DNA repair and recombination proteins [BR:
orn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DV701_04590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AXH95504
UniProt:
A0A345NKE6
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All DBs
Position
980086..983214
Genome browser
AA seq
1042 aa
AA seq
DB search
MTARVIWTTYGRPALDALRDVVAELKQDDPLHPVTLIVPSNICGIAARRHLAHGVHPGRP
AIAGLWITTLPRLAEQLAAPRLTSDGRRPATRALVGATVRGVLRGEPGIFGEVADHPSTA
RALARAHHDLRDVDETACHAVAGTSGLCADVVRVHRATRERIARGHYDETDLLHTASATL
TPERAAELGSVVIYLPQELTRAAAGLAATLARLTRTHVVAGHCGDSRADAAVVEAVRSAV
PDAPPPPSRTAPTVHRVAHASDSDDEVRCAVREVVRALRTTPAHRVAVLYAARDPYARLL
HEHLAAAGIEVNGPGVRPVAERAAARLVLGLLQTARTGYRRTDVLRALGELPVVTFDQAG
ASAAPVPLPLWEPITREAGVVGGDDWDERLTFHQRSLEHRLADELYDSTRDRLTRHRDAT
TAMRHFMATLRERLDALDDAATWTEAAEVLRGTLDSLLPPATHRRLPPAEQHAVLTIHRA
LSQLHPLDGTPTTPSRTAVEEILGLELDGALPRVGTFGRGVLVAPLGQAVGLDLDVVHVL
GLAEDLCPGTLHEDSLLPERAREATGWALPTTRRRADATHRALLAAIESAARVTGHFPRG
DLRRHSHRLPSRWLLPSLRALSGDPHLPATEWERGSAPAGGAIRGSPSFAGSLRTTMHPA
TEQEWRVRAHVAGTAPADPVVAATQELLRSRRGDGFSRFDGHLAGVDGLPDHAAGATAVS
PTALESYATCPHGYFLRRLLHVEPVEAPEEIITINAADLGSIVHEAMDGLVREAGERDEL
PSHGRPWSSAQRARLLRLGDEVGARYESEGRTGHPRLWARRRQWVRTVLDRMLTDDDAWR
AEHDAAVVASELAFGVHGTPPVTVSLPDGREVLLRGSADMVDRRRDGTLLVADIKTGRKR
SFRGISEEDPVLGGSKLQLPAYALAARAGHGQDHTAVEALYWFVGRDTGRVQLPLTDSVM
ERYAETLALLVDGIAAGRFPQRAPKTADYGYTQCSSCNPDGLGHAEVRERWELLRSVPEL
RDYTALVEPDALDPASAEEDEV
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcacgcgtgatctggacgacctacggtcgccctgcgctcgacgccctcagggat
gtggtcgccgagctcaagcaggacgacccgctccaccccgtcacgctcatcgtcccgagc
aacatctgcggcatcgccgcccgccgccacctcgctcacggcgtccacccgggccgcccg
gccatcgccggcctgtggatcaccacgctcccccgcctcgccgagcagctcgccgccccg
aggctcacgagcgacgggcgtcggccggccacgcgcgccctcgtcggcgcgaccgtccgc
ggcgtgctgcggggtgagccgggcatcttcggcgaggtcgccgaccatccgtccacggcc
cgggcactcgcccgcgcccatcacgacctgcgcgacgtcgacgagaccgcctgccacgcc
gtcgcgggcaccagcggtctgtgcgccgacgtggtccgcgtccaccgggcgacccgcgag
cgcatcgcccgcggccactacgacgagaccgacctgctccatacggcttccgccaccctg
acccccgagcgcgcggctgagctgggcagcgtcgtcatctacctgccccaggagctcacg
cgcgccgcggcagggctggcggccaccctcgcccggctcacccgcacccacgtcgtggcc
ggccactgcggtgacagccgggcggacgccgccgtcgtcgaggcggtcaggtccgccgtg
ccggacgctcccccgccgccctcccgcaccgcgccgaccgtgcaccgggtcgcccacgcc
tcggactccgacgacgaggtccggtgcgccgtccgcgaggtggtccgtgccctgcgcacc
accccggcccaccgggtcgcggtcctgtatgccgcccgcgacccctacgcgcgtctgctc
cacgagcacctcgccgcggcagggatcgaggtcaacggccccggcgtgcggccggtcgcc
gagcgggcggccgcgcggctggtgctcggtctgctgcagaccgcccgcaccggctaccgg
cggacggacgtgctgcgggcgctcggcgagctgccggtcgtcaccttcgaccaggccggt
gcctccgccgctccggtgcccctcccgctgtgggagcccatcacccgggaggcgggcgtg
gtgggcggggacgactgggacgagcggctgaccttccaccagcgatcgctcgagcaccgt
ctggctgacgagctctacgacagcacccgcgaccggctcacccggcaccgcgacgccacc
accgccatgcggcacttcatggccaccctgcgcgagcgcctcgacgccctcgacgacgcc
gccacctggaccgaggccgcggaagtgctgcgcggcacgctcgactcgctcctgcctcct
gccacccaccgccgcctcccgccggcggagcagcacgcggtgctcaccatccacagggcg
ttgtcgcagctgcacccgctcgacggcacgccgaccacgccctcgcgcaccgcggtggag
gagatcctcggcctcgagctggacggtgcgctgccccgggtcggcacgttcggacgcggc
gtcctcgtcgcccccctgggtcaggcggtcgggctcgacctcgacgtcgtgcacgtgctg
gggctggcggaggacctgtgtcccgggaccctgcacgaggactcgctcctgccggagcgg
gcgcgggaggccaccggctgggcgctgcccaccacccgccgccgtgccgacgccacccac
cgggcgctgctggccgcgatcgagtccgccgcccgcgtgaccggccacttcccccgcggc
gacctgcgccggcactcgcaccggctcccctcgcgctggctgctgccgtcgctgcgcgcg
ctcagcggcgacccgcacctgccggccacggagtgggagcgcggatccgcacccgccggc
ggcgcgatccgtgggtcgccgtcgttcgcgggcagcctgcggacgacgatgcacccggcc
accgagcaggagtggcgcgtccgcgcccacgtggccggcaccgcgccggcggacccggtc
gtcgcggcgacgcaggagctgctgcggtcccgccgcggggacggcttcagccgcttcgac
ggccacctcgcaggcgtcgacgggctgcccgaccatgcggccggcgccaccgccgtctcg
cccaccgcgctcgagagctacgccacctgcccgcacggttacttcctgcgacggctcctg
cacgtcgaaccggtggaggcgcccgaggagatcatcaccatcaacgccgccgacctcggc
tcgatcgtccacgaggcgatggacggcctggtccgtgaagcgggcgagcgcgacgagctg
ccgagccacggacggccctggtcgagcgcccagcgcgcacgcctcctccggctcggcgac
gaggtcggcgcccgctacgagtcggaaggacgcaccggtcacccccggctgtgggccagg
cgcaggcagtgggtccggaccgtcctggaccgcatgctcaccgacgacgacgcctggcgc
gccgagcacgacgccgcggtggtcgccagcgagctcgcgttcggggtccacgggacgccg
ccggtgacggtgtccctgccggacggccgcgaggtgctgctgcgcgggtccgccgacatg
gtcgaccgtcgccgcgacggcacgctgctggtcgccgatatcaagaccgggaggaagcgc
tcgttcaggggcatcagcgaggaggacccggtgctcgggggcagcaagctccagcttccg
gcctacgccctcgccgcgagggccggccacggtcaggaccacaccgccgtcgaggcgctc
tactggttcgtcggcagggataccggccgggtgcagctgccgctcaccgactcggtcatg
gagcggtatgccgagaccctcgccctgctcgtcgacggcatcgcagcggggaggttcccc
cagcgggccccgaagacggctgactacggctacacgcagtgctcctcctgcaaccccgac
ggtctgggtcatgcggaggtccgcgagcggtgggagctcctgcgctcggtgcccgagctg
cgggactacaccgcgctggtcgagccggacgccctggacccagcatcggcggaggaggac
gaggtatga
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