KEGG   Ornithinimicrobium avium: DV701_05420
Entry
DV701_05420       CDS       T05559                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
orn  Ornithinimicrobium avium
Pathway
orn03030  DNA replication
orn03430  Mismatch repair
orn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:orn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DV701_05420
   03430 Mismatch repair
    DV701_05420
   03440 Homologous recombination
    DV701_05420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:orn03032]
    DV701_05420
   03400 DNA repair and recombination proteins [BR:orn03400]
    DV701_05420
Enzymes [BR:orn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DV701_05420
DNA replication proteins [BR:orn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DV701_05420
DNA repair and recombination proteins [BR:orn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DV701_05420
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DNA_pol_IIIA_C HHH_3
Other DBs
NCBI-ProteinID: AXH95632
UniProt: A0A345NKS4
LinkDB
Position
complement(1189393..1192977)
AA seq 1194 aa
MPAPASPAKNFVHLHNHTEYSMLDGAARIDDLLAGAAELGMPAVAMTDHGFIFGAYEFWK
KAQKYDVKPIIGLEAYLTPGTHRTDKTRVKYGEGGRDDVSGGGAYTHMTMLARNNNGMHN
LFRMASLASMEGYYFKPRMDRELLETYGQGLLVTTGCPSSEVQTRLRLGQYDKAIGWAAD
LKDIFGAENVFCELMDHGIAIERQVRQDLLRLAKDLDLPLLATNDLHYTKQEDAIAHAAL
LCVQSGSTMQDPNRFKFDGDGYYLKTAEEMRHIWRELPEACDNTLLVAERCQISFTEGEG
RYMPRFPVPQGEDDVSWFVKEVERGLHRRYPEGVPDYASKQAAYETEVIVGKGYPSYFLV
VADFINWAKDNGIRVGPGRGSGAGSMCAYAMGITDLDPVPHGLIFERFLNPERQSMPDFD
VDFDDRRRSEVIRYVTEKYGDDRVAMIVTYGTIKAKQALKDASRVMGYPFAMGEKLTKAM
PPDVMGKGIPLTGIHDPEHKRYGEAGEFRELLAEDPHAADVFETASGLEGLKRQWGVHAA
GVIMSSEPLIDLIPIMRREQDGQIITQFDYPTCEALGLVKMDFLGLRNLTVLDDALTNIR
DNRGEDIDLDALSKDMTDEATYKLLGRGDTLGVFQLDGNGMRQLLRLMQPDNFEDISAAL
ALYRPGPMGVNAHTNFALRKNGKQELTPLDPQLDGKLQPQMVEALEPILGITHGLVIYQE
QVMEIAQKLAGYTLGNADLLRRAMGKKKKEVLDAEYVPFSDGMKANGYNEASIAALWGVL
VPFSDYAFNKAHTAAYGVISYWTAYLKANYPAEYMAALLTSVGDDKDKTALYLAECRRMG
IAVLPPDVNASVANFAAVGDDIRFGLSAIRNVGHNVVGAVVAAREEKGDFTSFEDFLRKS
PVVVCNKRTIESLCKAGAFDSLGHTRQGLVSVHERYVEALVDEKKQEAIGQDSLFSGFGF
GDGGDEGAGMQIVTLPAVPDLEWDKAVLLAFEREMLGLYVSDHPLNGIEHILSQHASAPI
LEIVGEEGAKDGDFVTVAGLMTNLQLKRTKNGDPYARLSVEDMAGSIDVVFWPRTYMTIS
TMLAEDTVAVVKGRLKKSDDGVELMANELSLPDIKQGPRGPVILQMPLTRATDGLAHRLK
GVLANHPGGTEVHVRLTQPGRTVLLRLDETLRVTASPELFGDLKALLGPNCMSS
NT seq 3585 nt   +upstreamnt  +downstreamnt
atgccagccccagccagccccgcgaagaacttcgtccacctgcacaaccacaccgagtac
tcgatgctcgacggtgcggcgaggatcgacgacctgctcgccggcgcggccgagctgggg
atgccggccgtcgcgatgaccgaccacggcttcatcttcggcgcctacgagttctggaag
aaggcgcagaagtacgacgtcaagccgatcatcggcctcgaggcctacctgacgccgggc
acgcaccgcaccgacaagacgcgggtcaagtacggcgagggcgggcgcgacgacgtctcc
gggggcggcgcctacacgcacatgacgatgctggcccgcaacaacaacgggatgcacaac
cttttccggatggcctcgctggcctcgatggagggctactacttcaagccgcggatggac
cgcgagctgctcgagacctacggccagggcctcctcgtcaccaccggctgcccctccagc
gaggtgcagacccggctgcggctcgggcagtacgacaaggccatcgggtgggccgcggac
ctgaaggacatcttcggcgcggagaacgtcttctgcgagctgatggaccacgggatcgcg
atcgagcgccaggtgcgccaggacctgctcaggctggccaaggacctcgacctgccgctg
ctggcgaccaacgacctgcactacaccaagcaggaggacgcgatcgcgcacgcggcgctg
ctgtgcgtgcagtccgggtcgacgatgcaggaccccaaccggttcaagttcgacggggac
gggtactacctcaagacggccgaggagatgcgccacatctggcgcgagctgcccgaggcg
tgcgacaacacgctcctggtggccgagcgctgccagatctccttcaccgagggggagggg
cgctacatgcccaggttccccgtgccgcagggcgaggacgacgtcagctggttcgtcaag
gaagtcgagcgcggcctgcaccggcgctaccccgagggcgtgccggactacgcgagcaag
caggcggcatacgagaccgaggtgatcgtcgggaagggctacccgtcctacttcctcgtc
gtcgccgacttcatcaactgggccaaggacaacgggatccgggtggggccggggcggggc
tccggcgccgggtcgatgtgcgcctacgcgatggggatcaccgacctggaccccgtcccg
cacgggttgatcttcgagcggttcctcaaccccgagcgccagtcgatgcccgacttcgac
gtggacttcgacgaccggcgccgctcggaggtgatccgctacgtcaccgagaagtacggc
gacgaccgggtggcgatgatcgtcacctacggcacgatcaaggccaagcaggcgctcaag
gacgcctcgcgggtgatgggctaccccttcgcgatgggggagaagctgaccaaggcgatg
ccgccggacgtcatgggcaagggcatcccgctgaccggcatccacgaccccgagcacaag
aggtatggcgaggccggggagttccgtgagctgctcgccgaggacccgcacgccgcggac
gtcttcgagaccgccagcgggctggaggggctgaagcgtcagtggggcgtgcacgccgcc
ggcgtcatcatgtccagcgagccgctcatcgacctgatcccgatcatgcgccgtgagcag
gacggccagatcatcacccagttcgactacccgacgtgcgaggcgctcgggctggtcaag
atggacttcctggggctgcgcaacctgaccgtcctggacgacgcgctgaccaacatcagg
gacaaccgcggggaggacatcgacctggacgcgctgtccaaggacatgaccgacgaggcg
acctacaagctgctcggccgcggcgacacgctcggggtcttccagctggacggcaacggc
atgcgccagctgctgcgcctcatgcagccggacaacttcgaggacatctccgcggcgctc
gcgctctaccggcccggcccgatgggcgtcaacgcgcacaccaacttcgcgctgcgcaag
aacggcaagcaggagctgaccccgctggacccgcagctggacggcaagctgcagccgcag
atggtcgaggcgctcgagccgatcctgggtataacgcacggattggtgatctaccaggag
caggtgatggagatcgcccagaagctcgccggctacacgctgggcaacgccgacctgctc
cgccgggcgatgggcaagaagaagaaggaggtcctcgacgccgagtacgtccccttctcc
gacgggatgaaggccaacggctacaacgaggcctcgatcgccgcgctgtggggcgtgctc
gtgcctttctcggactacgcgttcaacaaggcgcacacggcggcgtacggggtcatctcc
tactggacggcctatctcaaggcgaactacccggccgagtacatggccgcgctgctgacc
agcgtcggcgacgacaaggacaagaccgcgctctacctggccgagtgccggcggatgggc
atcgccgtgctgccgccggacgtcaacgcctccgtggccaacttcgccgcggtcggcgac
gacatccgcttcgggctgtcggcgatccgcaacgtcgggcacaacgtggtcggcgcggtc
gtcgcggcgcgcgaggagaagggcgacttcaccagcttcgaggacttcctgcgcaagtcg
ccggtcgtggtgtgcaacaagcgcacgatcgagtcgttgtgcaaggccggggcgttcgac
agcctcgggcacacgcggcagggcctggtcagcgtgcacgaacggtatgtcgaggcgctc
gtggacgagaagaagcaggaggccatcgggcaggacagcctcttctccgggttcggcttc
ggtgacgggggcgacgagggggctggtatgcagatcgtcaccctgccggccgtgcctgac
ctcgagtgggacaaggcggtgctgctggccttcgagcgggagatgctcgggctctacgtc
tccgaccacccgctcaacgggatcgagcacatcctgtcccagcacgccagcgcccccatc
ctggagatcgtgggcgaagagggtgccaaggacggcgacttcgtcaccgtcgccgggctg
atgaccaacctgcagctgaagcggaccaagaacggcgacccgtacgcgcggctgtcggtg
gaggacatggccggctcgatcgacgtcgtcttctggccgcggacctacatgacgatctcg
accatgctcgccgaggacaccgtcgcggtggtcaagggccggctgaagaagtccgacgac
ggcgtcgagctgatggccaacgagctctcgctgccggacatcaagcaggggccgcgcggt
ccggtgatcctgcagatgccgctgacccgggccaccgacgggctcgcgcaccggctcaag
ggcgtcctggccaaccaccccggcggcaccgaggtgcacgtgaggctgacccagcccggc
cggaccgtgctgctgcggctggacgagacgctgcgggtgacggcctcgccggagctgttc
ggcgacctcaaggcgctgctcggtccgaactgcatgagcagctga

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