Ornithinimicrobium avium: DV701_06215
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Entry
DV701_06215 CDS
T05559
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
orn
Ornithinimicrobium avium
Pathway
orn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
orn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DV701_06215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
orn03019
]
DV701_06215
03400 DNA repair and recombination proteins [BR:
orn03400
]
DV701_06215
Enzymes [BR:
orn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DV701_06215
Messenger RNA biogenesis [BR:
orn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DV701_06215
DNA repair and recombination proteins [BR:
orn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DV701_06215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HEM4
Cas3-like_C_2
Mhr1
Motif
Other DBs
NCBI-ProteinID:
AXH95774
UniProt:
A0A345NL66
LinkDB
All DBs
Position
complement(1371223..1373433)
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AA seq
736 aa
AA seq
DB search
MTRSEDPAGATMVEGAGVGTPDETLVATAHDALRRLVGSPGAQFRDGQLDAVLALVQERS
RVLVVQRTGWGKSAVYFVATALRRAQHAGPTIIVSPLLALMRDQIAAAARAGVRAVTMNS
ANATEWDTVRAALAADEVDVLLVSPERLNNPRFREEQLPDLAARCGLLVVDEAHCISDWG
HDFRPDYRRIRTLLDALPEGTPVLATTATANERVVEDVVEQLGVGGAVVRTVRGPLARAS
LRLGVLPRLTPEQRLGWIVAHLTDLPGSGIVYCLTVAAAEDVAEALRTAGHEVAAYTGRT
DPEERERLETALRENQVKALVATSALGMGFDKPDLGFVVHLGAPSSPVAYYQQVGRAGRA
TDRADVLLLPGSEDRDIWSYFATVSMPRQDQADAVLTALAEARRPLSTPALETMVDVRRT
RLELLLKVLDVEGAVDKVQGGWVGTGQPWVYDRERYQRVADARVREAELMVAYQQTSKCR
MAFLQETLDDPTASPCGRCDNCAGVWYPTEIPDEAVGAARTQLGGVGVRVDPRAQWPTGM
PRLGVDVKGRIAAEEQAEPGRALARLSDLGWGQRLRTALAEGTRVVDPEDPDAAEQPGRP
VPPEVVRAVVQVLAGWDWAARPVGVVAMPSRRRPAVVSSLAEQISQIGRLPMLGRLDYAD
GGPVGEPGGNSAFRLANVWDRITVGPELREALASARGPVLLVDDVVDSRWTLTIASRALR
LAGAGAVLPLVLAVDG
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcagcgaggacccggcaggagccaccatggtcgagggagcgggtgtcggcacc
cccgacgagacgctggtggccacggcccacgacgcgttgcgccgcctggtcggcagcccc
ggtgcgcagttccgggacgggcagctcgacgccgtgctcgccctggtgcaggagcgctcg
cgggtgctcgtcgtgcagcgcaccgggtggggcaagtccgcggtctacttcgtggcgacc
gcgttgcggcgggcccagcacgccggacccacgatcatcgtctcccccctgctggccctg
atgcgcgaccagatcgccgcggccgcccgggccggcgtccgggcggtgacgatgaactcg
gccaacgccaccgagtgggacaccgtgcgggcggccctggcggccgacgaggtcgacgtc
ctcctggtcagtccggagcggctcaacaacccgcgcttccgcgaggagcagctgcccgac
ctcgcggcccgctgcgggcttctggtcgtcgacgaggcgcactgcatcagcgactggggt
cacgacttccgtccggactaccggcgtatccggaccctcctcgacgcgctcccggagggc
acgccggtcctggcgacgacggccaccgccaacgagcgggtcgtcgaggacgtcgtcgag
cagctcggcgtcgggggtgcggtcgtgcgcaccgtccgtggtccgttggcgcgggcctca
ctgcgcctgggcgtgctgccccggctcaccccggagcaacggctgggctggatcgtcgcc
cacctgaccgatctgccgggcagcggcatcgtctactgcctgacggtggccgccgccgag
gacgtcgccgaggcgctacggaccgcggggcacgaggtagcggcctacacggggcgcacc
gaccccgaggagcgcgaacgtctggagaccgcgctcagggagaaccaggtcaaggcgctc
gtggcgaccagcgccctcggcatgggcttcgacaagcccgacctcggcttcgtcgtgcat
ctgggcgcgccgagctcgccggtggcctactaccagcaggtcggtcgtgccggtcgcgcc
accgatcgcgccgacgtgctgctcctgcccggctcggaggaccgggacatctggtcctac
ttcgcgacggtgtcgatgccccgccaggaccaggcggacgccgtcctgaccgccctggcc
gaggcgcgacgtccgctgtccacgcccgcgctggagacgatggtcgacgtgcgccgcacc
aggctcgagctgctgctcaaggtgctcgacgtcgagggcgcggtcgacaaggtccagggc
gggtgggtcggcaccggccagccctgggtctacgaccgtgagcgttaccagcgggtggcc
gacgcacgcgtgcgcgaggccgagctgatggtcgcctaccagcagacctcgaagtgccgg
atggccttcctccaggagaccctcgacgaccccacggccagcccgtgcgggaggtgcgac
aactgcgccggggtctggtacccgaccgagatcccggacgaggcggtcggggcggcacgg
acccagctcggcggtgtcggcgtgcgggtcgacccccgggcgcagtggccgaccggcatg
ccgaggctgggcgtcgacgtcaagggccggatcgccgcggaggaacaggccgagcccggc
cgtgccctggcccggctctccgacctgggttggggacagcggttgcgcacggccctggcc
gagggcacccgtgtcgtcgacccggaggacccggacgcggcggagcagcccggacggccg
gtgccgccggaggtcgtgcgggccgtggtgcaggtgctggccggctgggactgggcggcc
cgcccggtcggcgtggtggcgatgccctcgcgccgccgtccggccgtcgtcagttccctc
gccgagcagatcagccagatcggccggctgccgatgctcggcaggctggactacgccgat
ggcggcccggtgggagagccgggcggcaacagcgcgttccggctggccaacgtgtgggac
cgcatcaccgtcggtcccgagctgcgcgaagctctggcctcggcgcgcggcccggtcctg
ctggtcgacgacgtcgtggactcgcgctggaccctgacgatcgcctcccgcgcgctgcgc
ctcgccggggccggggccgtgctcccactggtgctggctgtcgacggctga
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