Ornithinimicrobium avium: DV701_10210
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Entry
DV701_10210 CDS
T05559
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
orn
Ornithinimicrobium avium
Pathway
orn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
orn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DV701_10210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
orn03400
]
DV701_10210
Enzymes [BR:
orn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DV701_10210
DNA repair and recombination proteins [BR:
orn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DV701_10210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
ResIII
AAA_SelU
Motif
Other DBs
NCBI-ProteinID:
AXH96443
UniProt:
A0A345NN35
LinkDB
All DBs
Position
2227323..2230709
Genome browser
AA seq
1128 aa
AA seq
DB search
MDDFSIKGDLPTGTVLLEASAGTGKTWTIAALVTRFVAEGVTPLREMLVVTFSRAASQEL
RARVREQLLLAERAVAGEIARQGGTEVTDVRRDELLDLLLDCDPAELRLRHRRLREALTD
FDAATIATVHQFCQQVLRSLGAAGATDAGAQLVEDLDELLVEVVDDLYLRAFRTRPPAFG
RAQALEIARTVVDDVYARVRPTDADVDDPASVPARRARFAEAVRAELDVRKRRLQVMHYN
DLLTQLDEALAEEDSPARARMRRRWQVVLVDEFQDTDPIQWSVLERAFSGHCRAMVLIGD
PKQAIYGFRGGDVVTYLTAAATAEHRQTLPCNFRSDPGVVTALRHLLGGAALGEDDIVVH
PVEPALQGTRLEGAPHASPVRLRQVLAGEHLRGADSIGAVRDHLFPDLALDVAALLGSGA
TFEGEPVRAHHVAVLAHKGSDLRLAQQALRDVGVPAVMAGGMSVLQTPAAQDWLALLEAM
VAPHRSGLTRAAALTDLLGFSALDLDAGGEEVDDELAGLTRDLAAVYGRQGIAAVMEQLV
VRGLAPRVLGRVGGERDLTDLVHLAELLHEAGRNDQLGLTALLDWLRTQMAEDVPTSVSA
LTRRLDSDAAAVQLMTIHGSKGLQFPVVYLPALADRFVHETPRIPRGHEADPGRSRFLDV
GGPGGPTWKDSVRLAKDEESGESLRTLYVAMTRAQSQVVTWWAPTGRNTARSPLHRVLFG
RAPGGAAVPETAKVPDDAGATATLQAWADLGAIALERADHAPLADVPPPDRTGDLALAPW
TRHVDHEWRRTSYTGLSTPREEAGALTGGVSSEPEVVPREDEPDTVDPVLDTAPLLPGLE
TTLPGSDLPSPMADLPVGATFGSLVHAVLEHADPDAAHGLPAELAGHVAEQAAWWPVHDL
DPEALTAALVAVHDTPLGPLAGGVTLRDVPVSDRLRELDFELPLGGGDLRRTPAAEATLL
GDLVPLLRAHLPTGDPVRAWADVLDASPELAAQQLRGYLTGSVDVVLRTGGRYLVVDYKT
NWLGRAEEPLTAADYRPEKLEEAMGHSSYPLQALLYAVVAHRFLRWRLRGYDPGRHLGGV
LYLYVRGMCGPDTPVVDGHPCGVFSWKPPVALVLAVSDLLDGAKGAAA
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggacgacttctcgatcaagggcgacctgcccaccggcaccgtgctcctcgaggcgagc
gccggcaccggcaagacctggacgatcgccgcgctggtgacccgcttcgtggccgagggg
gtgacgccgctgcgggagatgctcgtggtgaccttcagccgcgccgccagccaggagctg
agggcgcgggtgcgcgagcagctcctcctcgccgagcgcgcggtcgccggcgagatcgcc
cggcagggcggcaccgaggtcacggacgtccggcgcgacgagctcctcgacctgctgctc
gactgcgaccctgcggagctgcgcctgcgccaccggcggctgcgcgaggccctcaccgac
ttcgacgcggccacgatcgccaccgtccaccagttctgccagcaggtgctgcgcagcctt
ggcgccgccggggcgaccgacgccggcgcccagctggtggaggacctcgacgagctgctc
gtcgaggtcgtcgacgacctctacctgcgggccttccgcacgcgcccgccggccttcggg
cgggcccaggccctggagatcgcgcgcaccgtggtcgacgacgtctacgcccgggtgcgg
cccacggacgccgacgtcgacgatcccgcgagcgtcccggcccgccgtgcccgtttcgcc
gaggcggtccgcgccgagctggacgtgcgcaagcgccgcctccaggtcatgcactacaac
gacctgctcacccagctcgacgaggcgctggcggaggaggactccccggcccgggcacgg
atgcgccgccgctggcaggtcgtgctcgtcgacgagttccaggacaccgacccgatccag
tggtcggtgctggagcgggcgttctccgggcactgccgggcgatggtgctcatcggcgac
cccaagcaggcgatctacggcttccgcggcggcgacgtggtcacctacctgacggccgcg
gcgaccgccgagcaccgccagaccctgccctgcaacttccggtcggaccccggagtggtc
accgcgctgcgccacctgctgggcggggcggccctgggcgaggacgacatcgtcgtgcac
ccggtcgagccggcgctgcagggcaccaggctcgagggggcgccgcacgcctcacccgtg
cggctgcggcaggtgctggccggggagcacctgcgcggggcggacagcatcggcgccgtg
cgcgaccacctcttccccgacctcgcgctcgacgtcgccgcgctgctgggctccggcgcg
accttcgagggcgagccggtcagggcgcaccacgtggcggtcctcgcccacaagggcagc
gacctgcggctggcgcagcaggcgttgcgcgacgtcggcgtcccggcggtgatggccggc
gggatgtcggtgctccagacgcccgcggcccaggactggctggccctcctggaggcgatg
gtcgccccgcaccgctccgggctcacccgggccgccgccctcaccgacctgctcgggttc
tcagccctcgacctggacgccggcggcgaggaggtcgacgacgagctggccgggctgacg
cgcgacctcgccgccgtctacggccggcaggggatcgccgcggtgatggagcagctcgtg
gtccgcgggctggccccgcgcgtgctcgggcgggtcggcggcgagcgcgacctcaccgac
ctcgtgcaccttgccgagctgctgcacgaggccggccgcaacgaccagctgggcctcacg
gcgctgctggactggctgcgcacccagatggcggaggacgtgccgacgtctgtctcggcg
ctcacccgccggctggacagcgacgccgccgccgtgcagctgatgaccatccacggcagc
aaggggctgcagttccccgtcgtctacctgcccgcgctggccgaccgcttcgtccacgag
accccgcggatcccccgcggccacgaggccgaccccggccgcagccgcttcctcgacgtc
ggcggccccgggggcccgacctggaaggactcggtccggctggccaaggacgaggagtcg
ggcgagtcgctgcggacgctctacgtcgcgatgacgcgggcccagtcccaggtcgtcacc
tggtgggcaccgaccgggcgcaacaccgcccgctcccccctgcaccgggtcctcttcggc
cgcgcacccggcggggccgccgtccccgagaccgcgaaggtccccgacgacgccggcgcg
accgccacgctgcaggcctgggccgacctcggagcgatcgccctcgagcgcgccgaccac
gccccgctcgccgacgtgcccccgcccgaccgcaccggcgacctggccctcgccccgtgg
acccggcacgtcgaccacgagtggcggcgcacgtcctacaccgggctgtcgaccccgcgc
gaggaggcgggcgcgctgaccgggggcgtgagcagcgagcccgaggtggtgccccgcgag
gacgagccggacaccgtcgaccccgtcctcgacacggccccgctgctgccggggctggag
acgacgctccccggctccgacctcccctccccgatggccgacctgccggtcggggcgacc
ttcggctcgctcgtgcacgcggtcctggagcacgccgacccggacgccgcgcacggcctg
ccggccgagctggccgggcacgtcgcggagcaggcggcctggtggccggtgcacgacctg
gaccccgaggcgctgaccgccgcgctcgtcgcggtccacgacaccccgctcgggccgctc
gccggcggcgtcaccctgcgggacgtccccgtctcggaccggctgcgcgagctggacttc
gagctgccgctcggcggcggcgacctgcgccgcacaccggcggcggaggccaccctcctc
ggcgacctcgtcccgctgctgcgcgcccacctgccgaccggcgaccccgtccgggcctgg
gcggacgtgctcgacgccagccccgagctggctgcccagcagctgcgcggctacctcacc
gggtcggtggacgtggtgctgcgcaccggtgggcgctacctcgtcgtcgactacaagacc
aactggctcggccgcgccgaggagccgctgaccgccgcggactaccgcccggagaagctg
gaggaggcgatgggccactcgtcctacccgctgcaggccctcctgtacgccgtcgtcgcg
caccgcttcctgcggtggcggctgcggggctacgaccccggccggcacctgggcggggtc
ctctacctctacgtgcgcgggatgtgcggcccggacacccccgtcgtcgacgggcacccc
tgcggggtcttctcctggaagcccccggtcgcgctggtgctcgccgtgtccgacctgctc
gacggggcgaagggagcagcggcatga
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