Ornithinimicrobium avium: DV701_12890
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Entry
DV701_12890 CDS
T05559
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
orn
Ornithinimicrobium avium
Pathway
orn00521
Streptomycin biosynthesis
orn00523
Polyketide sugar unit biosynthesis
orn00525
Acarbose and validamycin biosynthesis
orn00541
Biosynthesis of various nucleotide sugars
orn01100
Metabolic pathways
orn01110
Biosynthesis of secondary metabolites
orn01250
Biosynthesis of nucleotide sugars
Module
orn_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
orn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DV701_12890 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DV701_12890 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
DV701_12890 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DV701_12890 (rfbB)
00525 Acarbose and validamycin biosynthesis
DV701_12890 (rfbB)
Enzymes [BR:
orn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
DV701_12890 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_10
adh_short
KR
Sacchrp_dh_NADP
NmrA
Motif
Other DBs
NCBI-ProteinID:
AXH96892
UniProt:
A0A345NPD4
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Position
2839907..2840914
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AA seq
335 aa
AA seq
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MRLLVTGGAGFIGSNFVHFLLEHTDVRVAVLDKLTYAASREALEGLPCDRVELVVGDVTD
VELVDRLVGRLTDDGDAVVHFAAESHNDNSLRDPSPFVHTNIVGTFTLLEAVRRHGVRLH
HVSTDEVYGDLELDDPERFTESTAYAPSSPYSASKAGADHLVRAWVRSFGVRATLSNCSN
NYGPWQHVEKFIPRQITNLLDGGRVRLYGSGANVRDWIHVDDHSSAVWTILNHGRVGETY
LVGADGEKANLEVVRLILELMDRNPDDFDHVTDRPGHDLRYAIDPTKLRTELGWEPRFTS
FEEGLVRTIDWYAAHRDWWGPKKAAVEAGYAAKGQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttctcgtgactggtggggccggtttcatcggttccaactttgtccactttctg
ctcgagcacaccgacgttcgcgtggccgtgctggacaagctgacgtatgcggcgtcgcgt
gaggcgttggaaggtctgccgtgcgaccgtgtcgagctggtggtcggggatgtcacggat
gtggagctggtggatcgtctcgtcggtcgtctgaccgatgacggtgacgcggtggtccac
ttcgcggcggagtcccacaacgacaactccctccgcgaccccagccctttcgtgcacacc
aacatcgtggggacgttcacgctgctggaggcggtgcgaaggcacggggtgcgcctgcac
cacgtgtcgaccgacgaggtctacggcgacctcgagttggacgaccctgagcggttcacg
gagtccactgcctacgcgccctcctcaccgtactcggccagcaaggcgggggcggaccac
ctggtgcgggcgtgggtgcgctcgttcggggtgcgggcgacgctgtcgaactgctccaac
aactacgggccctggcagcacgtggagaagttcatcccccgtcagatcacgaatctcttg
gacgggggccgggtcaggctctacggcagcggcgcgaacgtgcgggactggatccacgtg
gacgaccactcctcggcggtgtggacgatcctcaaccacggccgggtgggtgagacctac
ctcgtcggtgccgacggggagaaggccaacctggaggtggtgcgcctgatcctggaactg
atggatcgtaacccggacgacttcgaccacgtcaccgaccggcccgggcacgacctgcgg
tacgcgatcgacccgaccaagctgcggaccgagctgggctgggagccacggttcacctcc
ttcgaagaaggcctggtacgcacgatcgattggtatgcagcgcaccgggactggtggggc
ccgaagaaggctgcggtcgaggccggctacgcggcgaagggtcagtga
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