Ornithinimicrobium avium: DV701_13090
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Entry
DV701_13090 CDS
T05559
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
orn
Ornithinimicrobium avium
Pathway
orn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
orn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DV701_13090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
orn03400
]
DV701_13090
Enzymes [BR:
orn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DV701_13090
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DV701_13090
DNA repair and recombination proteins [BR:
orn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DV701_13090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
Zn_Tnp_IS91
Zn_ribbon_8
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
AXH96927
UniProt:
A0A345NPG9
LinkDB
All DBs
Position
2884256..2885116
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AA seq
286 aa
AA seq
DB search
MPELPEVQALVDFLGERTTGRVVTDVELGSIAVLKTFDPPPDALVGRPVDAVGRRGKFVD
LDVDGTHLVFHLARAGWLRWYDEVPPTRVRPGRTPIALRVRLDDGSGFDLTEAGTKKGLA
AYVVTDPSAIKGVAALGPDPLAEDFSLADFAALLEGRRTQVKGLLRDQTVLAGVGNAYSD
EVLHAARLSPFALAASLTEEEVARLYEALRTTLTAAVLAAEGKPAAQLKDAKRAGMNVHG
RTGQACPVCGDTVREVSFADSSLQYCPTCQTGGKELADRRMSRLLR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagctgcccgaggtgcaggcgctcgtcgacttcctgggcgagcggacgaccggt
cgcgtggtcaccgacgtcgagctgggctcgatcgcggtcctcaagaccttcgacccgccg
ccggacgccctcgtgggccgcccggtcgacgcggtcggcaggcgcggcaagttcgtcgac
ctcgacgtcgacgggacgcacctggtcttccacctcgcccgggcgggctggctgcgctgg
tatgacgaggtgccgcccacccgcgtgcgtcccggcaggacgccgatcgccctgcgtgtg
cgcctcgacgacgggtccggcttcgacctcaccgaggccggcaccaagaaggggctggcg
gcctacgtcgtgaccgacccctccgcgatcaagggcgtcgcggccctgggtccggacccg
ctggccgaggacttctcgctggccgacttcgccgcgctgctcgaggggcggcgcacgcag
gtcaaggggctgctgcgcgaccagacggtgctggcgggcgtgggcaacgcctactccgac
gaggtgctgcacgcggcgcggctctcgcccttcgcgctggcggcctcgctgaccgaggag
gaggtggcgcgcctctacgaggcgctgcgcaccaccctgaccgcggcggtgctggccgcc
gagggcaagcccgcggcccagctcaaggacgccaagcgggccgggatgaacgtgcacggc
cgcaccggccaggcctgcccggtgtgcggggacacggtgcgcgaggtgtccttcgccgac
tcctcgctgcagtactgccccacctgccagaccggtggcaaggagctggccgaccggcgg
atgtcgcggttgctgcgctga
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