Ornithinimicrobium avium: DV701_14400
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Entry
DV701_14400 CDS
T05559
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
orn
Ornithinimicrobium avium
Brite
KEGG Orthology (KO) [BR:
orn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
orn03032
]
DV701_14400 (topA)
03400 DNA repair and recombination proteins [BR:
orn03400
]
DV701_14400 (topA)
Enzymes [BR:
orn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DV701_14400 (topA)
DNA replication proteins [BR:
orn03032
]
Prokaryotic type
DNA Topoisomerases
DV701_14400 (topA)
DNA repair and recombination proteins [BR:
orn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DV701_14400 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AXH97149
UniProt:
A0A345NQ41
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All DBs
Position
3156243..3159029
Genome browser
AA seq
928 aa
AA seq
DB search
MGYRGARGPVSEPRRIRGTRCPRRSTPVVAGRKLVIVESPGKVKSIGEYLGPDYTVDASI
GHIRDLPQPRDLPPEMKKGPYGKFAIDVDHDFEPYYVVDADKKKKVAELKRRLKDADELY
LATDEDREGEAIAWHLLEVLKPKVPVRRMVFHEITKEAIRRAVNETRELDMHRVDAQETR
RVLDRLYGYEISPVLWRKVKQGLSAGRVQSVATRMVVERERERMAFRSASYWDVEGDFAP
SGGGPSASNAFTARLTGLDGRKVATGRDFADDGTLKNAKAVQLDAVGAQAVADGTREGEV
VVSEVAEKPYTRRPSAPFTTSTLQQEASRKLRLNSQSTMRTAQRLYEGGYITYMRTDSTT
LSSSAVSAARTQARDMYGAEYVPDSPRVYGKKAKGAQEAHEAIRPAGDRFRTPAQVAGEL
RGQEYGLYELIWKRTVASQMADAKGSTATVRLAATLPEGTRGGASMEGKELRRAEFSASG
TVITFRGFLAAYEEGRDEVRYGDQDGMGTRLPKLSEGVALETLRTEAEGHQTVPPARYTE
ATLVKALEEKGIGRPSTYASTVGTVQDRGYVRTKGSALVPTWLAFAVTQLLERHFPSLVD
YDFTASMEEGLDRIEAGEVQRVDWLQRFYFGDEATSLEGLRDLVEDLGEIDAKGVSTIPI
GDGVVVRVGRYGPYVEVAGEDGEPRRATVTDDVAPDEMTPEKARELLEAAADDGRVLGVD
PASGHEIVARAGRYGPYVTEVLPESDEAPKRGAKKVKPRTGSLFQSMDLATIDLETALKL
LSLPRVVGVDPGSGEEITAQNGRYGPYLKKGTDSRSLTAESQIFEITLEEALAIYAQPKQ
RGRAAAKPPLREFGEDPVSGRKVVVKDGRFGPYVTDGETNATLRKDDEPESLTEERAFEL
IAEKRAKGPTTRKRAAKKTTAKKTTKKS
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgggctaccgtggcgcccgaggtcccgtgtccgagccgcgacgaatccgcggcacgcgg
tgtccgaggaggagcacgcccgtggttgcaggacgcaagctggtcatcgtcgagtcgccc
ggcaaggtcaagagcatcggggagtacctcgggcccgactacaccgtggacgccagcatc
ggccacatccgtgacctgccgcagccccgcgacctgcccccggagatgaagaaggggccc
tacggcaagttcgcgatcgacgtcgaccacgacttcgagccctactacgtcgtcgacgcg
gacaagaagaagaaggtcgccgagctcaagcgccgcctcaaggacgccgacgagctctac
ctcgccaccgacgaggaccgcgagggcgaggcgatcgcctggcacctgctcgaggtgctc
aagcccaaggtgccggtcaggcggatggtcttccacgagatcaccaaggaggcgatccgg
cgggccgtcaacgagacgcgcgagctggacatgcaccgcgtcgacgcccaggagacccgc
cgcgtgctcgaccggctctacggctacgagatctcgcccgtcctgtggcgcaaggtcaag
cagggactgtcggccgggcgggtgcagtccgtcgccacgcggatggtggtcgagcgtgag
cgggagcgtatggcgttccgctccgcctcctactgggacgtcgagggcgacttcgccccc
tccggcgggggaccctcggccagcaacgccttcaccgcccggctgaccggtctcgacggg
cgcaaggtcgccaccggccgtgacttcgccgacgacgggacgctcaagaacgccaaggcc
gtgcagctggacgcggtcggcgcgcaggcggtcgccgacggcacccgcgagggcgaggtg
gtggtcagcgaggtcgcggagaagccctacacacgccgcccgtccgcgccgttcaccacc
tccacgctccagcaggaggcctcccgcaagctgcggctgaacagccagtcgacgatgcgc
accgcccagcggctctacgagggcggctacatcacctacatgcggaccgactcgacgacc
ctgtccagctcggcggtcagcgcggccaggacccaggcgcgcgacatgtacggcgccgag
tacgtccccgacagcccccgcgtctacggcaagaaggccaagggggcccaggaggcgcac
gaggcgatccgtcccgccggcgaccgcttccgcaccccggcccaggtggccggggagctg
cgcgggcaggagtacggcctgtacgagctcatctggaagcggaccgtcgcctcgcagatg
gccgacgccaagggctcgaccgcgaccgtccggctggccgcgacgctgccggagggcacg
cgcggcggcgcgagcatggagggcaaggagctgcgcagggccgagttctccgcctccggg
accgtcatcaccttccgcggcttcctcgccgcctacgaggagggccgggacgaggtgcgc
tacggcgaccaggacggcatgggcacccggctgccgaagctgtccgagggcgtggcgctg
gagacgctgcggaccgaggccgaggggcaccagaccgtcccgccggcgcgctacaccgag
gccacgctggtcaaggcgctggaggagaaggggatcggacgcccgtcgacctacgcctcg
acggtggggacggtccaggaccgcggctacgtgcgcaccaagggctcggcgctcgtgccg
acctggctggccttcgccgtcacccagctgctggagcggcacttcccgagcctggtggac
tacgacttcaccgcgtcgatggaggagggcctggaccggatcgaggccggggaggtgcag
cgggtcgactggctgcagcggttctacttcggcgacgaggcgacgtcgctggaggggctg
cgggacctggtcgaggacctcggcgagatcgacgccaagggtgtgtccacgatcccgatc
ggggacggcgtggtcgtgcgcgtggggcgttacgggccctacgtcgaggtggcgggcgag
gacggcgagccgcgacgcgccaccgtcaccgacgacgtcgccccggacgagatgaccccg
gagaaggcccgcgagctgctcgaggcggccgcggacgacggccgggtcctgggcgtggac
ccggcgagcggccacgagatcgtcgcgcgggccggccgctacggcccctacgtcaccgag
gtgctgcccgagagcgacgaggcgccgaagaggggcgccaagaaggtcaagccgcgcacc
gggtcgctcttccagagcatggacctggccacgatcgaccttgagaccgcgctcaagctg
ctctcgctgccccgggtggtcggcgtcgaccccgggtcgggcgaggagatcaccgcgcag
aacggccgctacgggccctacctgaagaagggcaccgactcgcgctcgctgaccgcggag
tcccagatcttcgagatcacgcttgaggaggcgctggcgatctacgcccagcccaagcag
cgtggacgggcggccgccaagccgccgctgcgcgagttcggcgaggatcccgtgtcgggc
aggaaggtcgtggtcaaggacgggcgcttcggcccctacgtcaccgacggcgagaccaac
gccacgctgcgcaaggacgacgagccggagtcgttgaccgaggagcgcgccttcgagctc
atcgcggagaagcgcgccaaaggcccgacgacccgcaagcgggcagccaagaagacgacg
gcgaagaagaccaccaagaagtcctga
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