Odobenus rosmarus divergens (Pacific walrus): 101362361
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Entry
101362361 CDS
T05148
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro04068
FoxO signaling pathway
oro05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
101362361 (RAG1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
101362361 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oro04121
]
101362361 (RAG1)
Enzymes [BR:
oro01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101362361 (RAG1)
Ubiquitin system [BR:
oro04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101362361 (RAG1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1_C
RAG1_pre-RNase_H
RAG1_ZnC2
RAG1
RAG1_DNA-bd
zf-RAG1
zf-C3HC4_2
zf-C3HC4
zf-RING_6
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
101362361
NCBI-ProteinID:
XP_004409384
UniProt:
A0A2U3WKH9
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MAVSLPPTLGLTSAPDEIQHPHIKFSEWKFKLFRVRSFEKAPEEAQVEKKISSEGKPSLE
QSPAVLDKADGQKPALSQPALNAHPKFLKKSHDDGKARDKAIHQANLRHLCRICGNSFKT
DGHNRRYPVHGPVDGKTQVLLRKKEKRATSWPDLIAKVFRIDVKADVDSIHPTEFCHNCW
RILYRKFSSAPCEVHFPRNATMEWHPHTPSCDICHTARQGLKRKSHQPNGQLSKKLKTVV
DQARRAHRHKRRAPARISSKELMQKISNCSNIHLSTKLLAVDFPAHFVKSISCQICKHIL
ADPVETTCKHVFCRICILRCLKVMGSNCPCCQYPCFPTDLESPVKSFLSILNSLMVKCPA
KECNEEVSLEKYNHHVSSHKESKETFVHINKGGRPRQHLLSLTRRAQKHRLRELKLQVKA
FADREEGGDVKSVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFLS
CSQYHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYHPFEWQPPLKNVSSSTDVGIIDG
LSGLSSSVDDYPVDTIAKRFRYDSALVSALMDMEEDILEGMRAQDLDDYLNGPFTVVVKE
SCDGMGDVSEKHGSGPAVPEKAVRFSFTVMKITVAHGSENVKVFEEVKPNSELCCKPLCL
MLADESDHETLTAILSPLIAEREAMKSSQLMLEMGGILRTFKFIFRGTGYDEKLVREVEG
LEASGSVYICTLCDATRLEASQNLVFHSITRSHSENLERYEVWRSNPYHESVEELRDRVK
GVSSKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEAYRNPNASKEERKRWQATLDKHL
RKKMNLKPIMRMNGNFARKLMTKETVEAVCELIPSEERHEALRELMDLYLKMKPVWRSTC
PAKECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNVYKNSGFTLS
SQSGVGDPLGLEDSLETQDSMEF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctctttgccacccaccctgggactcacttctgccccagatgaaattcagcat
ccacatattaaattttcagaatggaaatttaaactgttcagggtacgatcttttgaaaag
gcacccgaagaagctcaagtagaaaagaaaatttcctctgaggggaaaccctctctggag
caatctccagctgtcctggacaaggctgatggtcagaagccagctctgagtcaaccagca
ttaaatgctcaccctaagtttctgaagaaatcccatgatgatgggaaagcaagagacaaa
gcaatccaccaagccaatcttcgacatctctgccgtatctgtgggaattcttttaaaact
gatgggcacaataggagatatccagtccacgggcctgtggatggtaaaacccaagtcctt
ttacgaaagaaggaaaagagagccacttcctggccagacctcattgccaaggtcttccgg
atcgatgtgaaagcagatgttgactcgatccaccccactgagttctgccataactgctgg
cgcatcctgtacaggaagtttagcagtgccccatgtgaggttcacttcccaaggaatgca
accatggagtggcacccccacacaccatcctgtgacatctgccacactgcccgccaggga
ctcaagaggaagagtcatcagccaaacgggcagctcagcaaaaaactcaaaactgtggtt
gaccaagcgagaagagcccatcggcacaagagaagagctccggcaaggattagcagcaag
gaactgatgcagaagatttccaactgcagtaatatacatcttagtaccaagcttcttgca
gtggacttcccggcacactttgtgaaatccatctcctgccagatttgcaaacacattctg
gctgaccctgtggagaccacctgtaagcatgtattttgcaggatctgcattctcagatgc
ctcaaagtcatgggcagcaattgtccctgttgccaatatccctgcttccctaccgacctg
gagagtccagtgaagtcctttctgagcatcttgaattccctgatggtgaaatgtccagcc
aaggagtgcaacgaggaggtcagcctagaaaaatataatcaccacgtctcaagccacaag
gaatccaaagagacttttgtgcatattaacaaagggggtcggccccgtcagcatctcctg
tccttgacccgaagggctcagaagcaccgcctgagggagctcaagctgcaagtcaaggct
ttcgccgacagagaagaaggtggagatgtgaaatccgtgtgtctgaccttgttcctgctg
gcgctgagggcaaggaatgagcacagacaagcggacgagctggaggccatcatgcaggga
cggggctctggcctgcagccagctgtgtgcttggccattcgtgtaaacaccttcctcagc
tgcagtcagtaccacaagatgtacaggactgtgaaagccatcaccgggaggcagattttt
cagcctttgcatgcccttcggaatgctgagaaggtcctcctgccaggctaccaccccttt
gagtggcagccccctctgaagaacgtgtcctccagcaccgacgtgggcattattgatggc
ctgtccggcctgtcctcctcggtggatgactaccctgtggacaccattgcgaagcgcttc
cgctacgattcggctttggtatctgctctgatggacatggaagaagacatcttggaaggc
atgagagcccaagaccttgatgactacctgaatggccccttcaccgtcgtggtgaaggag
tcttgtgacggaatgggagatgtgagcgagaagcacgggagcgggccagcagttccagaa
aaggcagttcggttttcgttcacggtcatgaaaattactgtagcccatggctcagaaaac
gtgaaggtgtttgaagaagtcaaacccaactctgaactgtgttgtaagcccctgtgtctc
atgctggcagatgagtctgaccatgagaccctgacggccatcctgagccctctcattgcc
gagagggaggccatgaagagcagccaattaatgcttgagatgggaggcatccttcggact
ttcaagttcatctttaggggcaccggatatgatgagaaacttgtccgggaagtcgaaggc
ctcgaggcttctggctcagtctacatttgtaccctttgtgacgccacccgcctggaagcc
tctcaaaatcttgtcttccactccatcaccagaagccactctgagaacctggagcgctat
gaggtctggcgttccaacccataccacgagtcagtggaagaactgcgggatcgggtgaaa
ggggtctcatcgaaacctttcatcgagactgtcccttccatagatgccctccactgtgac
attggcaacgcggctgagttctacaagattttccagctagagataggggaggcatatagg
aatccaaatgcttccaaagaggaaaggaaaagatggcaggctacattggacaagcatctc
cggaagaagatgaacctgaaacccatcatgaggatgaacggcaactttgccaggaagctc
atgaccaaagagacagttgaagcagtttgtgaattaattccctctgaggagaggcacgaa
gctctgagggagctgatggacctttacctgaagatgaagcctgtatggcgatcaacgtgt
cccgcaaaagagtgcccagaatccctctgccagtatagcttcaattcacagcgttttgct
gagctcctttctaccaagttcaagtatagatatgagggcaaaatcaccaattattttcac
aaaaccctggcacacgtccctgaaattattgagagagatggctccattggggcatgggcg
agcgagggaaatgagtctggcaacaaactgttcaggcgcttccgaaaaatgaacgccaga
cagtccaaatgctatgagatggaagatgtcttgaaacaccactggctgtatacctccaaa
tacctgcagaagtttatgaatgctcataatgtgtataaaaactctgggtttaccttaagc
tcgcagtcaggcgtaggggacccattaggcctggaggactctctggaaactcaagattcg
atggaattttaa
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