Odobenus rosmarus divergens (Pacific walrus): 101362386
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Entry
101362386 CDS
T05148
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro04120
Ubiquitin mediated proteolysis
oro04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101362386 (SYVN1)
04120 Ubiquitin mediated proteolysis
101362386 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oro04121
]
101362386 (SYVN1)
Enzymes [BR:
oro01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101362386 (SYVN1)
Ubiquitin system [BR:
oro04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101362386 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
101362386
NCBI-ProteinID:
XP_012423672
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSPPPPEPADQGPPPAAHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPPSTSAALSRPGGAA
TTAASAASASAPAPGSAPASEAGPTPGFPFPPPWMGMPLPPPFAFPPMPVPPAGFAGLTP
EELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSVSPTEET
APAVVPTAPPTSIPSSEATTPSPGVSPPAPEPEKPPAPESVGTEELPEDGEPDAAELRRR
RLQKLESPIAH
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgcagtgatgatggcggccagcctggcgctgactggggccgtcgtggct
catgcctactacctcaagcaccagttctaccccactgtggtgtacttgaccaagtccagc
cccagcatggcagtcctctacatccaggcctttgtccttgtctttctcttgggcaaagtg
atgggcaaggtgttctttggacagttgagggccgcagagatggagcaccttctggaacgt
tcctggtatgctgtcactgagacttgtctggccttcaccgtctttcgggacgacttcagc
ccccgctttgttgcactcttcactctccttctcttcctcaagtgttttcactggctggct
gaggaccgtgtggactttatggaacgcagccccaatatctcctggctctttcactgccgc
attgtctctcttatgttcctcctgggtatcctggacttcctcttcgtcagccatgcctat
cacagcatcctgacccgtggggcctctgtgcagctggtgtttggctttgagtacgccatc
ctgatgactatggtgctcaccatcttcatcaagtacgtcctgcactctgtggacctgcag
agcgagaacccctgggacaacaaggccgtctacatgctctacacggagctgtttacaggc
ttcatcaaggttttgctctacatggccttcatgaccatcatgatcaaggtgcacaccttc
cctctctttgccatccggcctatgtacctggccatgaggcagttcaagaaggctgtgacg
gatgccatcatgtctcgccgagccatccgcaacatgaacacgctgtatccagatgccacc
ccggaggaactccaggcaatggacaatgtctgcatcatctgccgagaagagatggtgact
ggtgccaagagactgccctgcaaccacattttccacaccagctgcctgcgctcctggttc
cagcggcagcagacctgccctacctgccgtatggacgtcctccgggcatcactgccgacc
cagtcaccaccgcccccggaacctgcggatcaagggccaccgccagctgctcatccccca
ccacttctgccgcagccccccaacttcccccagggcctcctgcctccctttcctccaggc
atgttcccgctctggccccccatgggccccttcccacctgtcccacctccccccagctca
ggagaggctgtggcccctccatccaccagcgcagccctttctcggcccggtggagcagcc
accaccgctgcttctgcggcctctgcctcggcccccgcccctggctccgccccggcctct
gaggctggccccaccccaggcttccccttcccgcccccctggatgggcatgccgctgcct
ccaccttttgccttccccccaatgcccgtgccccctgcgggctttgctgggctgacccca
gaggagctgcgggctctggaaggccacgagcggcagcacctggaggctcggctgcagagc
ttgcgcaacatccacacgctgctggatgccgccatgctgcagatcaaccagtacctcacc
gtgctcgcttccttggggcccccccggcctgccacctcagtcagccccactgaggagact
gcccctgcagttgtccctactgccccccccaccagcatccccagctctgaggctaccacc
ccatccccaggagtctccccaccagcccctgagcctgaaaagcctccagctcctgagtca
gtaggcacagaggagctaccggaggatggggagccagatgcagcagagctccgtcgccgc
cgcctgcaaaagttggagtcccctattgcccactga
DBGET
integrated database retrieval system
