KEGG   Odobenus rosmarus divergens (Pacific walrus): 101362634
Entry
101362634         CDS       T05148                                 
Symbol
THOC3
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
oro  Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03013  Nucleocytoplasmic transport
oro03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101362634 (THOC3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    101362634 (THOC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oro03019]
    101362634 (THOC3)
   03041 Spliceosome [BR:oro03041]
    101362634 (THOC3)
Messenger RNA biogenesis [BR:oro03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     101362634 (THOC3)
Spliceosome [BR:oro03041]
 Complex C
  Other components
   EJC/TREX
    101362634 (THOC3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101362634 (THOC3)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st ANAPC4_WD40 WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_Aladin Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_EML eIF2A Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_WDR36-Utp21_1st WD40_RFWD3 Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st RMC1_N Beta-prop_HPS5 NBCH_WD40 WDR90_beta-prop_4th Tricorn_2nd Beta-prop_EIPR1 B-prop_COPA_B_2nd Beta-prop_ACSF4 Beta-prop_WDR75_1st Beta-prop_NUP159_NUP214 Beta-prop_SPT8 PD40 Beta-prop_WDR41 Beta-prop_Nup120_160 Peptidase_S9_N Beta-prop_NWD2_C Cytochrom_D1 Beta-prop_WDR11_1st DPPIV_N Beta-prop_ELP1_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 101362634
NCBI-ProteinID: XP_004401503
UniProt: A0A2U3W0U6
LinkDB
Position
Unknown
AA seq 351 aa
MAVAAAAMGPSALGQSGPGSMAPWCSVTSGPTRYVLGMQELFRGHSKTREFPAHSAKVHS
VAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASG
DKTIRIWDVRTTKCIATVNTKGENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ
FKFEVNEISWNNDNNMFFLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFA
TGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDK
LWEVQCESPTFTVAWHPKRPLLAFACDDKDGKYDSSREAGTVKLFGLPNDS
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggcagtggctgcggcggccatggggccctcggcgctgggccagagcgggcctggttca
atggctccctggtgctcagtgaccagcggcccaacacgctacgtcctgggaatgcaggag
ctgttccgcggacacagcaagacgcgcgagttccctgcacacagcgccaaggtgcactcg
gtggcctggagctgcgacgggcgtcgcctggcctcagggtctttcgacaagacggccagc
gtatttctgctggagaaggaccggttggtaaaagaaaacaattatcggggacatggggat
agtgtggaccagctttgttggcatccaagtaatcctgacctctttgtcacagcatctgga
gacaaaaccattcgcatctgggatgtgaggactacaaaatgcattgccactgtgaacact
aaaggggagaacattaatatctgctggagtcctgatgggcagaccattgctgtaggcaac
aaagatgatgtggtgacctttattgatgccaagacacaccgttccaaagcagaggagcag
ttcaagtttgaagtcaatgaaatctcatggaataatgacaacaacatgttcttcctgaca
aatggcaatggttgtatcaacatcctcagctacccagagctgaagcctgtgcagtccatc
aatgcccatccttccaactgcatttgtatcaagtttgaccccatggggaagtactttgcc
acaggaagtgcagatgctttggtcagcctctgggatgtggatgagttggtttgtgttcgg
tgcttttccaggctggattggcctgtgaggaccctcagttttagccacgatggaaaaatg
ctggcatcagcctcggaagatcattttattgacattgctgaagtagagacaggagacaag
ctatgggaggtgcagtgtgagtccccgactttcaccgtggcttggcaccccaaaaggcct
ctgctggcatttgcctgtgatgacaaagatggcaaatatgacagcagtcgggaagcagga
actgtgaagctgtttgggcttcctaatgactcctga

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