KEGG   Odobenus rosmarus divergens (Pacific walrus): 101363054
Entry
101363054         CDS       T05148                                 
Symbol
LSM8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
oro  Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03018  RNA degradation
oro03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101363054 (LSM8)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101363054 (LSM8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oro03019]
    101363054 (LSM8)
   03041 Spliceosome [BR:oro03041]
    101363054 (LSM8)
Messenger RNA biogenesis [BR:oro03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     101363054 (LSM8)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     101363054 (LSM8)
Spliceosome [BR:oro03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    101363054 (LSM8)
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 101363054
NCBI-ProteinID: XP_004408535
UniProt: A0A2U3WIB3
LinkDB
Position
Unknown
AA seq 96 aa
MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH
NT seq 291 nt   +upstreamnt  +downstreamnt
atgacgtccgccttggaaaactacatcaaccgaactgttgcagttataacttctgacgga
agaatgattgtgggaacactgaaagggtttgaccagaccattaatttgattttggatgaa
agccatgaacgagtgtttagctcttcacagggagtagaacaagtggtgctggggttatac
atcgtaagaggtgacaatgttgcagtcattggagaaattgatgaagagacagattctgcg
cttgatttggggaatattcgagcagaacctctaaactctgtagcgcactga

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