Odobenus rosmarus divergens (Pacific walrus): 101363744
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Entry
101363744 CDS
T05148
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101363744 (COL18A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oro04147
]
101363744 (COL18A1)
00535 Proteoglycans [BR:
oro00535
]
101363744 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
oro00536
]
101363744 (COL18A1)
Exosome [BR:
oro04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101363744 (COL18A1)
Proteoglycans [BR:
oro00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
101363744 (COL18A1)
Glycosaminoglycan binding proteins [BR:
oro00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101363744 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
DUF959
Collagen_trimer
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
101363744
NCBI-ProteinID:
XP_012421416
LinkDB
All DBs
Position
Unknown
AA seq
1464 aa
AA seq
DB search
MARLPGSRLGPPLLLLLVTYCLAAARADLLSLNWLWSTRTDGPTAELVSEPPGSPHGQPR
EDTGTRVAPQHGPVEQGRAPASSELPVERPEPGPGGTSPAGPDTKEENIAGVGAKILNVA
QGIRSFVQLWDDATPTTSPPGAEAPAPVTPTAPLTLPGPSSTPQENGTALWLGSGAPSSP
DTQRTEAGTLPVPTQLPPFPGGPSPAPPAAESLGTEVGLLQLLGEPPPPQVTQVEDPDVG
PAFVFGLDANSGQVARYHFPSPFFRDFSLHFHVRPATKDAGVLFAITDAAQAVVSVGVKL
SGVRDGHQHIQLLYTEPGATRTHTAASFRLPAFTGQWTRFALSVDGATVALFVDCELFQR
VPLVRSPRGLELEPGAGLFVAQAGGADPDKFQGMIAELRVRGDPHVSPLHCLEEDDEGGG
RVSGDFGSGLEETQEPLREQSGPSPKPSLPEAPPVTSPPLAAGRDVEDSRTEEIEEETTV
SSLGARTLPGLEAVTAGSVRSPGGGLEEGPAVQSPDAQPVPRPQGPPGPPGPPGKDGAPG
RDGEPGDPGEHGRPGDPGPQGFPGTPGDAGPKGEKGDPGVGPRGPPGPQGPPGPPGPSFR
HDKLTFIDMEGSGFGGDLESLRGPRGFPGPPGPPGVPGLPGEPGRFGMNSSDVPGPAGLP
GVPGRDGPPGLPGTPGPPGPPGKDGGPGKMGQKGSPGEVGAPGPKGSKGDPGPVGAPGEN
GLAGASGPAGPPGPPGPPGPPGPGLAAGFDDMEGSGGPFWLTAQGASGSQGLPGPPGVKG
DPGITGPPGTKGEVGAEGPPGFPGLPGREGSAGAQGPKGEKGTQGEKGDPGRDGVGQPGL
PGPPGPPGPVVYMSEQDKVLGGVPGPEGRPGFAGFPGPAGPKGNLGSKGQRGLPGPKGEK
GEPGPVFSPDGSMLAPAQKGAKGEPGFRGPPGPYGRPGHKGEIGFPGRPGRPGMNGLKGE
KGEPGHSSIGYGVRGPPGPPGPPGPPGPPGTPIYDSNAFMESGRPGPPGLPGLQGPSGPK
GDKGDVGPPGPPGQFPFDLLQLGTEMKGEKGDRGDTGQKGERGAPGGGAFFGSSAPGPPG
PPGIPGPKGESIRGQPGPPGPQGPPGIGHEGRQGPPGPPGPPGPPSFPGPYRQTISVPGP
PGPPGPPGPPGTMGTSSGVRIWATYQTMLDKVPEVPEGWLIFVAEREELYVRVRNGLRKV
LLGPRTPLPRGTDNEVAALQPPVGNPYPRRELTHSTARPWRADDILASPPRLPDPQPYPG
APQHGSYLHFQPARPTGGPTHTHQDYHPVLHLVALNSPQPGGMRGIRGADFQCFQQARAV
GLAGTFRAFLSSRLQDLYSVVRRADRTTVPIVNLRDEVLFPSWEALFSGSEGRLKPGARI
FSFDGRDVLQHPAWPQKSVWHGSDPSGRRLTDSYCETWRTEAAAATGQASSLLAGRLLAQ
KATGCHNTLIVLCIENSFMTSFSK
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggctcggctccccggcagccgcctgggccccccgctgctgcttctcttggtcacatat
tgcctcgcggccgcccgcgctgacctgctgagcctaaactggctgtggtccactaggacc
gacgggcccacagccgaactggtctctgagcccccggggagcccacatgggcagcccaga
gaggacaccggcacacgcgtggccccccagcatggccccgtggagcaggggagagcccct
gccagctcggagctccccgtggagaggccggagcctggcccgggaggtacctcccccgcg
ggcccggacacgaaggaggagaacatcgccggcgtgggagccaagatcctgaatgtggct
cagggcatccggagctttgtccagctgtgggatgacgccactcccaccacgagccccccc
ggggcagaggcgccagcccctgtgacccccacggcccccctcactctccccgggccctcc
agcaccccccaggagaacgggaccgccctctggctgggcagcggggccccgagctctccg
gacacccagaggaccgaggccggcaccctgccagtgcccacccagctgcctcccttcccg
ggcgggccctcgccagcaccacctgctgcagaaagcctgggcacggaggtggggctcctg
cagctgcttggagagcccccacccccgcaggtcacgcaggtggaagaccccgacgtcggg
ccagccttcgtctttggcctggatgccaacagcggccaggtggcccggtaccacttcccc
agcccgttcttccgtgacttctcgctgcacttccacgtccggcctgccaccaaggatgcg
ggggtgctgtttgccatcacggatgcggcccaggcggtggtgtccgtgggcgtgaagctg
tcgggcgtacgtgatgggcaccagcacatccagctcctgtacaccgagcccggggccaca
cgaacccacacagccgccagcttccgtctgcccgccttcactggccagtggacgcgcttc
gccctcagtgtggacggcgcaactgtggcgctgtttgtggactgcgagttgttccagagg
gtgcccttggtgcgctccccgcggggcctggagctggagcccggcgctggcctcttcgtg
gcccaggctggaggagcagatcctgacaagttccaggggatgatcgcggagctgagggtg
cgtggggacccccacgtgagccccctgcactgtctggaggaggacgatgagggcggcggc
agggtgtctggagacttcgggagcgggctggaggagacccaggagcctctcagggagcag
tcgggtccgtcgcccaaacccagcctccccgaggctcccccggtcacttctccgcccttg
gctgcaggcagggatgtggaagactccagaactgaagaaattgaggaagaaaccacggtg
tcctccttgggagctcggaccctccccggcttggaagcagtcaccgcagggagcgttcgg
agccctgggggcggcctggaagagggtcctgcagtgcagagtccagatgcacagcctgta
cccaggccacagggcccccctggccccccggggcctccggggaaggatggtgcccccgga
agggacggtgagccgggggatcccggtgaacatgggagaccgggcgaccctgggccgcag
ggcttccctggaaccccgggagacgcgggccccaagggcgagaagggcgaccctggggtt
gggccaagaggacccccgggaccccaagggcctccagggccaccaggaccctccttcaga
catgacaagctgaccttcattgacatggaggggtctgggttcggcggtgacctggagagc
ctccgaggccccagaggcttccctggccccccaggacccccgggcgtcccaggcctgcct
ggagaaccaggccgctttgggatgaacagctcagacgtcccaggacccgcaggccttcct
ggtgtgcccgggcgagacgggccccctgggcttcctggcaccccgggtccaccgggtcct
ccaggaaaagacggaggaccagggaagatgggccagaaaggcagccccggtgaagtgggc
gccccaggacctaagggaagcaagggtgaccctgggcctgttggcgctcctggggagaat
ggcttggcaggagcctccggaccagctggaccaccagggcccccaggaccccctgggcca
ccaggaccaggacttgccgcagggtttgatgacatggaaggctctgggggacccttctgg
ttgacggctcaaggagccagcgggtcgcagggactgcccggcccgcccggagtcaagggg
gatcctggaataaccggaccaccgggcaccaagggagaagtcggggccgaaggacctccc
gggttccccggcctccctggcagagagggctcggctggagcccagggacccaaaggagaa
aaagggacccagggagagaaaggcgacccagggagggatggagtggggcagcctggcctc
cccggaccccccggacccccggggcctgtcgtctacatgtcggagcaggataaagtgctg
ggaggcgtgccgggacctgagggcaggccggggttcgcgggctttcctggaccggccggg
ccaaagggaaatctgggctccaaaggccagaggggcctcccgggacccaagggcgagaag
ggtgagccgggcccggtcttcagccccgatggcagcatgctggcccccgcccagaaaggg
gccaagggagagcctggcttccgaggacccccgggcccctatggacggccggggcacaag
ggagagattggcttccctgggcggccgggtcgccccgggatgaacggattgaagggggag
aaaggggagccgggacacagcagcatcggctatggcgtgaggggtccacccggtccccca
gggcctccggggcccccaggccctcctgggactcccatctatgacagcaacgcctttatg
gagtctggccgccctggacccccaggattaccagggctccaggggccttctggacccaag
ggtgacaaaggagatgtgggccctccaggaccaccagggcagttcccgttcgacctcctg
cagctggggactgaaatgaagggggagaagggtgaccgaggggacaccgggcagaaagga
gaacggggtgcgcctgggggcggcgcattcttcggctcaagtgcgcccggcccccccggc
ccccccgggattccgggtcccaagggagagagcattcggggccagcctggcccacctgga
cctcagggaccccctggcatcggccatgaggggcgtcagggacctcctgggccccctggt
cccccagggcccccttcctttcccggcccttacaggcaaaccatcagtgttcctggcccc
ccaggcccacctgggccccctgggccccctggaaccatgggcacctcctctggggtgagg
atctgggccacgtaccagaccatgctggacaaggtgccggaggtgccggagggctggctc
atcttcgtggctgagagggaggagctgtatgtccgggtgcgcaacgggctccggaaggtc
ctgctggggccgcggacgccgctcccacgcgggacggacaacgaggtggctgccttgcag
ccccccgtgggcaacccgtacccccggcgggagctcacccactccacggcgcggccctgg
agggcagatgacatcctggccagccccccacgtctgccggacccccagccctaccccgga
gccccacagcacggctcctacctgcacttccagccagctcgccccactggcgggcccacc
cacacccaccaggactaccacccggtgctgcacctggtggcactgaacagcccccagcca
ggcggtatgcgaggcatccgcggggcggacttccagtgcttccagcaggcgcgcgccgtg
gggctggccggcaccttccgcgccttcctgtcttcacggctgcaagacctctacagcgtc
gtgcgccgggctgaccgcacaaccgtgcccatcgttaacctcagggacgaggtgctgttc
cccagctgggaggccttattctcgggctccgagggccggctgaagcccggggcccgcatc
ttctctttcgatggcagagatgtcctgcagcaccccgcctggccccagaagagcgtgtgg
catggctcagaccccagcggacgccggctgaccgacagctactgcgagacgtggcggacg
gaggctgcagcagccacgggccaggcgtcctcgctgctggctggccggctgctggcgcag
aaagccacgggctgccacaacaccctcattgtgctctgcatcgagaacagcttcatgacc
tccttctccaagtag
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